Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g01508 ATGGCCTTAGCCATCGTAATTCTTGCCCTGTTTTTACTCCTCTGTTTTTGCGCTGCTTTATTCCAATGGAATGAGGTTCGATACAGAAAAAATGGGTTGCCTCCTGGTACAATGGGTTGGCCTGTTTTTGGTGAAACCTCTGAGTTTCTTAAACAAGGTCCGAATTTTATGAATTCTAAAAGAGCAAGGTATGGGAGCTTTTTCAAATCACATATTTTGGGATCTCCTACGGTTATTTCTATGGATCCAGAGGTTAATAGATATATATTAATGAATGAATCTAAAGGACTTGTCGCTGGTTATCCTCAATCTATGCTTGATATACTTGGAACATGCAATATCGCTGCCGTACACGGCGATGCTCATAAGCTTATGAGAGGTGCTCTACTTGCTATTGTTGGTCCCACCATGATTAAGGATCGTCTTCTTCTTCAAGTTGATGAGTTTATGCGATCCCATTTGCGTAACTGGGATAGCCAAATCATTGATATTCAAGAAAAAACTAAACAGATGGCTTTCTGGACATCTTTGAAGCAGACTACCAGTATCGTATCCGGTCCATTATGGGAATCTTTCACCATAGAATTCTTTAAGCTCGTGCTGGGCACTTTCTCGCTCCCTATCGATCTTCCGGGCACGAATTACCGTATAGGAGTTCAGGCAAGGAATAACATAGTAAAGCTATTGAAGAAGCTGATTAGTGAGAGAGTAAATTCAAAGATTCAAAAAGATGACATGCTTGGATATTTATTGAGTGAAGAGAACAAATATAAACTAAATGAGGAACAGATTATTGATCAAATCATTACTGTTTTCTATTCTGGTTATGAAACTGTTTCAACAACTTCAATGATGGCTGTAAAGTTCCTTCATGATCATCCCAAAGTTCTTCAGCAACTCAGAGAAGAACATATAGCATTAAGAGAGAAGAAAAATCCTGAGGACCCGATTGATTGGGATGATTTTAAAGCAATGGATTTCACGCGTGCGGTGATTTTTGAAACATCAAGGCTAGCAACTGTTGTTAATGGTGTTTTGAGAAAAACTACGAAGGATTTGGAAGTAAATGGGTTTCTAATTCCTAAAGGATGGAGGATTTATGTGTATACTAGAGAGATAAACTATGACCCTTTTCTCTATTCTGAACCATTCACCTTCAACCCTTGGAGATGGCTGGATAAAAACTTAGAGTCTCATAATTATTTTTTCCTCTTTGGAGGTGGAACTAGGCTTTGTCCTGGCAAAGAATTGGGAATTGCAGAGGTTTCTACATTTTTACATTACTTTGTAACTAAATACAGGTGGGAAGAAGTTGGAGGATGTAAGCTCTTGAAATTTCCAAGAGTAAAAGCTCCAAATGGGTTTCACATTAGGGTTTCATCGTATTGA 1389 38.16 MALAIVILALFLLLCFCAALFQWNEVRYRKNGLPPGTMGWPVFGETSEFLKQGPNFMNSKRARYGSFFKSHILGSPTVISMDPEVNRYILMNESKGLVAGYPQSMLDILGTCNIAAVHGDAHKLMRGALLAIVGPTMIKDRLLLQVDEFMRSHLRNWDSQIIDIQEKTKQMAFWTSLKQTTSIVSGPLWESFTIEFFKLVLGTFSLPIDLPGTNYRIGVQARNNIVKLLKKLISERVNSKIQKDDMLGYLLSEENKYKLNEEQIIDQIITVFYSGYETVSTTSMMAVKFLHDHPKVLQQLREEHIALREKKNPEDPIDWDDFKAMDFTRAVIFETSRLATVVNGVLRKTTKDLEVNGFLIPKGWRIYVYTREINYDPFLYSEPFTFNPWRWLDKNLESHNYFFLFGGGTRLCPGKELGIAEVSTFLHYFVTKYRWEEVGGCKLLKFPRVKAPNGFHIRVSSY 462
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14434513 14437699 - MELO3C019193.2.1 Cme08g01508 335771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g01508 462 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 405 414 IPR017972 GO:0005506|GO:0016705
Cme08g01508 462 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g01508 462 PRINTS E-class P450 group I signature 263 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g01508 462 PRINTS E-class P450 group I signature 329 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g01508 462 PRINTS E-class P450 group I signature 369 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g01508 462 PRINTS E-class P450 group I signature 402 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g01508 462 PRINTS E-class P450 group I signature 412 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g01508 462 SUPERFAMILY Cytochrome P450 27 458 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g01508 462 Pfam Cytochrome P450 34 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g01508 462 PANTHER CYTOCHROME P450 FAMILY PROTEIN 7 460 - -
Cme08g01508 462 PANTHER CYTOCHROME P450 26 7 460 - -
Cme08g01508 462 PRINTS P450 superfamily signature 274 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g01508 462 PRINTS P450 superfamily signature 330 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g01508 462 PRINTS P450 superfamily signature 403 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g01508 462 PRINTS P450 superfamily signature 412 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g01508 462 Gene3D Cytochrome P450 24 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g01508 Cme-Chr8:14434513 Cme09g00202 Cme-Chr9:1562626 0 dispersed
Cme08g01508 Cme-Chr8:14434513 Cme01g02852 Cme-Chr1:35383310 1.72E-97 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g01508 K09590 - csv:101204494 880.167