Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g01542 ATGGCGGATTTCGGAAGCTACATAATTCTCTTCTTCATATGGTTAGTTTCCACCTTAACAATTCGTTTACTCTTTGCCAAAAACAAACTTAACTCTCATCTTCCTCCGAGCCCTTTTGCTCTCCCCATCATTGGCCATCTCCATCTCCTCGGTCCGTTGCCCCACAAAGCTTTCCACAAGCTGTCGACCCGTTACGGACCTCTAATGCACCTCCGTTTAGGATCAGTCCCTTGCGTGGTAGTTTCCTCACCCGAAACCGCAAAACAAGTCCTCAAAACTCATGAATCTTCCTTCTCAAATAGACCCCATTTGTCAGCAGTTGACTATCTAACCTATGGCTCAGCTGATTTCTCGTTTGCACCTTATGGACCTTTTTGGAAGTTCATGAAGAAGCTTTGTATGTCGGAGCTCCTAGGAGGAAGGACGCTCGACAGCCTCCGACCCACGAGAGAGGACGAGATTCGTCGGTTTATACAGTTGTTGCAATCAAAGGCAGCGGATGGAAAAGAAGTTGATGTTGGTGGAGAGTTGATGAGGCTGAGCAACAATGTGATATCAAGAATGACATTGGGGAAAAGATGTGCTGAAGAAGAGGAAGAAGCTGAGGGAATAAGGAAATTGGTGAAGGATATAGCTGTACTTTCAGGGACTTTCAATGTTTCAGATTATATTTGGTTTTGTAAGAATTTGGATTTGCAAAGGCTTGGGAAAAGGCTTAAGGAAGTTCGTGAGAGGTTTGATGAGTTGATGGAGAGAATGATAAAGGACCATGAAGAGAATTGTAGTGATGGGAAAGTGAAGGATTTGCTTGATATTTTGCTTCTTAAGTTTGGAGATGAAAATACAGAGGTCAAGTTGACCAGAGAGAACATCAAGGCCTTTGTTCTGGACATATTTGCAGCAGGAACCGATACATCAGCCATAACAATAGAATGGGCATTAGCAGAGCTAATAAACCATCCAAACATAATGAAGAAAGCCAGAGAAGAAATTCATAAAGTTGTAGGAAACAACAAAGTGGTTGAAGAATCAGACATTCCCAATCTTCCTTATCTCCAAGCAATAGTAAAAGAGACGTTAAGGCTTCATTCAAGCCCATTGATAGTGAGGGAATCAACTGAGAGTTGCACAATAAACGGTTATGAAATTGCACCAAAAACTCAAGTTTATGTGAATGTTTGGGCCATTGGGAGAGATCCAAAACATTGGGAAAATCCTCTTGAGTTTGAGCCAGAAAGGTTTATGGACAAAGAAGGGAGCGTGATCAGCGGTGATTTGAGAGGGCAAAATTTTCAGTTGTTGCCATTTGGGAGTGGGAGAAGAAGCTGTCCTGGGACAACTCTTGCTTTGTTGATGGTTCAAACAACTTTAGGTTGTATGGTTCAATGCTTTGATTGGAAGGTTAATAGTGGGAAAGTTGATATGGAAGAAGGGCCTGGCCTTACTCTTCCTAGGGCACACCCTTTGGTTTGTATTCCCAAGCCTTGTTTAACTCCGTTTCCACCGCTTTGA 1512 42.72 MADFGSYIILFFIWLVSTLTIRLLFAKNKLNSHLPPSPFALPIIGHLHLLGPLPHKAFHKLSTRYGPLMHLRLGSVPCVVVSSPETAKQVLKTHESSFSNRPHLSAVDYLTYGSADFSFAPYGPFWKFMKKLCMSELLGGRTLDSLRPTREDEIRRFIQLLQSKAADGKEVDVGGELMRLSNNVISRMTLGKRCAEEEEEAEGIRKLVKDIAVLSGTFNVSDYIWFCKNLDLQRLGKRLKEVRERFDELMERMIKDHEENCSDGKVKDLLDILLLKFGDENTEVKLTRENIKAFVLDIFAAGTDTSAITIEWALAELINHPNIMKKAREEIHKVVGNNKVVEESDIPNLPYLQAIVKETLRLHSSPLIVRESTESCTINGYEIAPKTQVYVNVWAIGRDPKHWENPLEFEPERFMDKEGSVISGDLRGQNFQLLPFGSGRRSCPGTTLALLMVQTTLGCMVQCFDWKVNSGKVDMEEGPGLTLPRAHPLVCIPKPCLTPFPPL 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 15101601 15105486 + MELO3C023178.2.1 Cme08g01542 335805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g01542 503 SUPERFAMILY Cytochrome P450 35 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g01542 503 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g01542 503 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g01542 503 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g01542 503 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g01542 503 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g01542 503 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g01542 503 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g01542 503 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g01542 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Cme08g01542 503 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 6 501 - -
Cme08g01542 503 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g01542 503 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g01542 503 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g01542 503 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g01542 503 PANTHER CYTOCHROME P450 93A2 6 501 - -
Cme08g01542 503 Coils Coil 232 259 - -
Cme08g01542 503 Pfam Cytochrome P450 35 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g01542 503 Gene3D Cytochrome P450 26 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g02218 Cme-Chr4:29366079 Cme08g01542 Cme-Chr8:15101601 3.66E-140 dispersed
Cme08g01542 Cme-Chr8:15101601 Cme08g00815 Cme-Chr8:5390947 8.85E-137 dispersed
Cme08g01542 Cme-Chr8:15101601 Cme04g02217 Cme-Chr4:29362209 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g01542 K24188 - csv:101213143 932.554