Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g01881 ATGGCAGAGGAGGCGGGGGCGGCGGCGGCGACTGGTTTCTTGCACAAGCTTTTAACGGGACGGTGGTTAATGTTATTTGCATCACTAATAATCATGGCAATGAACGGATCAGGCTACATGTTCGGCCTCTACTCCAACCACATCAAATCCATTTTTGGTTATGGTCAATCGGCTCTTAATTCGATCAGTTTTTTTAAGGACTTGGGGGCCAATCTTGGGGTGGTTTCCGGCATCCTTTACGAGGTGGCACCACCGTGGCTGGTTCTCTCGGTTGGCGCCATCCTCAACTTCTTCGGTTACTTCATGTTATGGTTGGCGGTTTCTGGCCGGACCGCTGCGCCGGGGTTGTGGTTGATGTGTGTTTACATGGGCGTTGCTGCTAACTCATTGTCTTTTGGTAATACGGCGGCTTTGGTTACTTGTCTTCGTAACTTTCCTCTTCATCGTGGTTGTCTTCTTGGCCTTCTCAAAGGGTACATAGGTTTAAGTGGTGCAATAATGACACAACTTTACCATGCTATGTATGGAGAGAACAACCCAGAAGGCCTTATTTTGATGATTGCTTGGCTCCCATCCGCCATTTCATTAGCTTCTCTTCCATTCATTCGACATATAAACTCCAACAACAACCAACGAAATGACCTCAAACCATTCTATAACCTTCTTTACATATCCCTTGCCCTGGCTGCTTCTCTCCTTGCCATTATTATCCCTCAAACTAAAATTCACTTCTCTAAAACTGACTACATCGCTGTCGCTTCTCTCGTCATTCTCTTTCTCCTCCTCCTGCTTGCCATCGTTGTAAACCAAGAACTCACCCTCCACAATCACCCACCCCCAATAACGTCGATACTAGTACAATCATCATCACCACACCTGACAACGATGTCAAGGAACGACCACACCATCTTGCAAGTGATTTTGAGTGTGGATATGGCAATTCTATTTGTGGCGACGACGTGCGGTGTTGGAGGAGTACTGACGGTGGTTGACAATGTTGCACAAATAGGTGCTTCATTAGACTATCCAACTCGTAGCATTTCGAGTTTTGTGTCGCTAATGAGCATTTGGAACTTCCTAGGACGTGTAATGGCAGGCTATGTTTCTGAATTTCTTTTGATGAAGTACCGATTCCCTCGGCCGTTGATGCTCACATTTGTAATACTACTGTCTTGCATTGGCCATATTATGATTGCGTTTGGAGTCCCAAACTCTCTTTATTTTGTATCCATCATCACTGGATTCTGCTTGGGGGCGCAATTGCCATTAACAGCCACGATCATATCTGATCTCTTTGGATTGAAACATTATTCGACGTTGTACAATGTGGGATCAGTGTCAAGCCCAGTCGGGTCCTACATTTTTAATGTTAGAGTGGCGGGTAGGGTTTATGATAGAGAGGGGGAAAGGCAAAGAAATGTGATGAGAAAAGTGTGTAAAGGAGTGGGGTGTTATAGGGTTAGTTTTATAATAATCATAGGGGCTTGTGTCTTTGGCAGTTTGCTTTCTGTTATTTTGGTGCTTAGGACAAGAAATTTTTACAAAAATGACATATATGCAAGGTTTAGAAAGGGAGAAGAAATTAAAACACCAGTACACACTACTACTGCTACTACTTTTTCCCTCACACATCAAGAAGGAATGAAACCTTAA 1653 44.22 MAEEAGAAAATGFLHKLLTGRWLMLFASLIIMAMNGSGYMFGLYSNHIKSIFGYGQSALNSISFFKDLGANLGVVSGILYEVAPPWLVLSVGAILNFFGYFMLWLAVSGRTAAPGLWLMCVYMGVAANSLSFGNTAALVTCLRNFPLHRGCLLGLLKGYIGLSGAIMTQLYHAMYGENNPEGLILMIAWLPSAISLASLPFIRHINSNNNQRNDLKPFYNLLYISLALAASLLAIIIPQTKIHFSKTDYIAVASLVILFLLLLLAIVVNQELTLHNHPPPITSILVQSSSPHLTTMSRNDHTILQVILSVDMAILFVATTCGVGGVLTVVDNVAQIGASLDYPTRSISSFVSLMSIWNFLGRVMAGYVSEFLLMKYRFPRPLMLTFVILLSCIGHIMIAFGVPNSLYFVSIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSYIFNVRVAGRVYDREGERQRNVMRKVCKGVGCYRVSFIIIIGACVFGSLLSVILVLRTRNFYKNDIYARFRKGEEIKTPVHTTTATTFSLTHQEGMKP 550
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 22828895 22831348 + MELO3C008907.2.1 Cme08g01881 336144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g01881 550 Pfam Major Facilitator Superfamily 335 510 IPR011701 GO:0022857|GO:0055085
Cme08g01881 550 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 525 - -
Cme08g01881 550 SUPERFAMILY MFS general substrate transporter 225 513 IPR036259 -
Cme08g01881 550 Pfam Nodulin-like 21 267 IPR010658 -
Cme08g01881 550 SUPERFAMILY MFS general substrate transporter 16 206 IPR036259 -
Cme08g01881 550 CDD MFS_Mch1p_like 20 499 - -
Cme08g01881 550 PANTHER FACILITATOR SUPERFAMILY PROTEIN, PUTATIVE-RELATED 8 525 - -
Cme08g01881 550 Gene3D MFS general substrate transporter like domains 307 514 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g02499 Cme-Chr4:31366366 Cme08g01881 Cme-Chr8:22828895 3.74E-141 dispersed
Cme08g01881 Cme-Chr8:22828895 Cme10g00105 Cme-Chr10:725073 0 dispersed
Cme08g01881 Cme-Chr8:22828895 Cme10g00102 Cme-Chr10:714269 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g01881 - - csv:101220925 938.332