Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g02009 ATGCATAAGCGTTCCGGGAAGCCACAGTCCGAATCTTTTTCGAATAAGATCTATAGATTCAGAGGGGTGTTATTGCTTATCTCTCTTTCTCTTTTCTTAATCGCATTTGTTCTTTATCTCATGCCGGCCCGTGAGGATTACTCTTTCAACCACCGCAAAGTTTCCCCTGATCATAGGTCGTCTTCTTCTTCCAAGACCTCTTTTGCTGTTATTTTTGATGCTGGTAGCTCTGGGAGTCGTGTCCATGTCTTTTGCTTTGATCATAATCTCGATCTCCTCCCCGTTGGAAAGGATATCGAACTTTTCGAACAACTTAAACCAGGACTGAGTGCATATGCTGACAGCCCCAAGGATGCGGCAGCTTCTCTAATTTCCCTTTTGGACAAAGCTCAAGATGTTGTTCCAAAAGGGCTGCGGCCAATGACTCCTGTTAGAGTTGGGGCAACTGCTGGCTTGAGGGCCTTGAAAGGTGATGCATCTGATAGAATTTTGCAGGCGGTTAGGGATCTCCTGAGAGACAAAAGTGAACTCAGGTTGGAAGGAGATGCTGTGTCTGTGATTGATGGAACTCAAGAAGGATCTTACCTTTGGGTGACTTTAAACTATCTGCTCGGGAACTTGGGTAAGAAGTATTCAGATACAGTCGGAGTTGTAGATCTTGGAGGAGGATCTGTTCAAATGGCATATGCTATCTCAGAAAAGGATGCTGCTCGATTATCAGATGCAGAGGGTGCATACATAAAAAAGATGTATCTGAAGGGAGCAACTTATTATCTCTATGTTCACAGTTATTTGCATTATGGGTTACTAGCTGCCCGAGCGGAGGTTCTGAGTGTTTCTGAAGATTCTAGCAATGACTGCATCCTATCTGGCTACGAAGGAGCATACCATTATGGGGGAAAGGACTACAAAGCATCGGCGTCTTCATCAGGGTCCAGCTTGAATGGATGTAGGAGCACGGTTTTGAAGGCTCTCAAGGTTAACGAATCCACATGTACTCACATGAAATGCACTTTTGGTGGTGTTTGGAATGGCGGAGGAGGAGATGGCCAGAAGAATCTCTTCGTTGCTTCATTTTTCTTTGACAGGGCAGCTGAGGCTGGTTTTGCTGACCCCAATGAGCCAGTTGCTAAAGTTCGCCCGGCAGACTTCAGCGATGCAGCAAAGCAGGCATGCCAAATCAAACTTGAGGATGCTAGTACGTATCCCCATGTCGAGAAGGATAACCTGCCGTATTTGTGTATGGATCTTGTGTATCAGTACACACTACTCGTAGATGGATTCGGGCTGGATCCATGGCAAGAGATCACATTGGTGAAGAAGGTTAAATATCAGAACTCCTTGGTTGAAGCTGCATGGCCTCTAGGTAGTGCCATCGAAGCTGTCTCGTCGTTAGCATAA 1401 45.75 MHKRSGKPQSESFSNKIYRFRGVLLLISLSLFLIAFVLYLMPAREDYSFNHRKVSPDHRSSSSSKTSFAVIFDAGSSGSRVHVFCFDHNLDLLPVGKDIELFEQLKPGLSAYADSPKDAAASLISLLDKAQDVVPKGLRPMTPVRVGATAGLRALKGDASDRILQAVRDLLRDKSELRLEGDAVSVIDGTQEGSYLWVTLNYLLGNLGKKYSDTVGVVDLGGGSVQMAYAISEKDAARLSDAEGAYIKKMYLKGATYYLYVHSYLHYGLLAARAEVLSVSEDSSNDCILSGYEGAYHYGGKDYKASASSSGSSLNGCRSTVLKALKVNESTCTHMKCTFGGVWNGGGGDGQKNLFVASFFFDRAAEAGFADPNEPVAKVRPADFSDAAKQACQIKLEDASTYPHVEKDNLPYLCMDLVYQYTLLVDGFGLDPWQEITLVKKVKYQNSLVEAAWPLGSAIEAVSSLA 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 25280053 25284809 + MELO3C008792.2.1 Cme08g02009 336272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g02009 466 Gene3D Exopolyphosphatase. Domain 2 188 443 - -
Cme08g02009 466 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 9 464 IPR000407 GO:0016787
Cme08g02009 466 CDD NBD_sugar-kinase_HSP70_actin 70 250 - -
Cme08g02009 466 Gene3D - 68 459 - -
Cme08g02009 466 Pfam GDA1/CD39 (nucleoside phosphatase) family 63 464 IPR000407 GO:0016787
Cme08g02009 466 PANTHER APYRASE-LIKE PROTEIN 9 464 - -
Cme08g02009 466 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 187 202 IPR000407 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme05g00930 Cme-Chr5:12692552 Cme08g02009 Cme-Chr8:25280053 3.62E-40 dispersed
Cme08g02009 Cme-Chr8:25280053 Cme12g01679 Cme-Chr12:23742279 5.90E-15 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g02009 K14641 - csv:101220305 890.567