Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g02094 ATGAAGGAAATTCGTGGTCTTGCATTTACATTTGCATTTGCATCTATATCTGTTTTCGTTTCCTTGTTCTTCGATGTTCATGTGGTTTTAGCACAAAATTACATCCCTCGGGATGTAATCCTCCTTGATTGTGGAGGACCTTCAACTGCTAACGACATCGATAGCCGGAAATGGAATACCGATGACAAATCTAAGTTTGTTCCGGCGGCAGGCGATAGCACTGTATCTAAAGCCGCTACTCAGGATCCTTCAGTTCCTGATATCCCTTTCATGACGGCTAGGGTTTTTAGTTCTAATTTCACCTACAGCTTTCCTGTGGCTCCTAGTCGTTTATTCGTTCGTCTCTACTTTTACCCTTCTTCTTATGGTGGACTTGATGCATCTGATGCTCTTTTCTCTGTTTCCACTCAATCCTATACTCTTCTTAAGAACTTCAGCGCTTCACAAACGGCTGCAGCTTTGAATTATGCCTATATCATTAAGGAATACTCTATCCATGTTGATGATGATAGGTTGAACTTGACTTTCATTCCATCCTCCACTCATCCAAAGGCTTATGCATTTGTGAATGGGATTGAGATTGTATCTATGCCTGATATTTATAGTGATACTTCTGGGAGTACCCTGATTGTTGGTCCATCTACTCCATTCACTGTGGACAATTCCACTGCGCTTGAGAACGTCTATCGGTTGAATGTCGGGGGGAATGATATTTCGCCTTCTGTTGATACCGGGATGTATAGGTCTTGGTTTGATGACACTCCATTCTTGTATGGTGCAGCACAGGGAGTAACGATGAGTACTGATCAAAACACAACGCTTAATTATCCGCCGGGCTTTCCTACTTATGTTGCACCGGAGAATGTCTACTCCACTGCTAGAGCAATGGGACCTGATAACAATGTCAATCTGAATTATAACTTGACATGGATTTTCCCTGTTGACTCTGAGTTCTTTTACCTTGTTAGGCTTCATTTTTGTGAGATTGCTGCAAATATCACAAAAATTAACCAAAGGGTGTTTGACATTTTCCTTTATAATAAAACTGCTATGGATAGTGCTGATGTGATTGCCTGGGCTGGAAGTAACGATACTCCTTTGTACAAAGATTATGTGGTTTTTGTTCCTGCTAATGGAAATCCACAGCAGGATTTATGGCTTGAACTGCATCCAGACAAGACCATGCTCCCCAATTACTATGATGCAATCTTAAATGGAGTGGAGATATTCAAAATTAATGACTCGAACGCTAATCTTGCTGGGCTAAATCCTATTCCTGCTCCAAAACAGGAGATTATTGATCCATCATTAGCTAAGCCAGCTTCTCACGGTAAATCAAAGAATAATTCAGGGGTGATTGCTGGAGTTGTTTGTGGAGCAGTTGTTTTAGCTCTGATTATTGGTTTCTTTGTTTTTGCTAAACGTCGCCGTGGGCGTGGTAAAGATTCTAGTACTGTTGAAGGACCGTCAGGATGGCTCCCTCTTTCTCTCTATGGAAATTCCCATTCAGCTGGATCTGCCAAGACAAATACAACTGGAAGCTATACATCCTCCCTGCCTTCGAACCTTTGCCGCCACTTTTCATTTTCTGAGATCAAGGCTGCCACAAGGGACTTTGATGAATCTTTACTACTTGGAGTTGGTGGTTTTGGCAAAGTGTACAAGGGAGAAATTGATGGTGGGACTACGAAAGTTGCCATCAAGCGTGGGAACCCTCTCTCTGAGCAAGGTGTTCATGAATTTCAAACAGAGATTGAAATGCTTTCTAAGCTTCGCCATCGCCACCTTGTTTCATTGATTGGCTACTGTGAAGAGAATTGTGAAATGATTCTTGTTTATGATTACATGGCTCATGGAACACTGCGAGAACATTTATACAAGACTCACAAGCCACCGTTGTCTTGGAGGCAAAGGCTCGAAATATGCATTGGAGCTGCCCGTGGTCTGCATTATCTTCACACCGGTGCAAAGCATACCATTATTCATAGAGATGTGAAGACAACCAATATCCTTTTAGACGAAAAGTGGGTGGCAAAAGTATCTGATTTTGGGTTGTCGAAAACTGGTCCTACTTTGGATCACACACATGTTAGCACTGTTGTGAAAGGTAGTTTCGGATACTTGGATCCTGAATACTTTAGGCGACAGCAATTGACCGACAAATCAGATGTTTACTCCTTCGGAGTCGTTCTCTTTGAAGTCCTATGTGCTCGGCCAGCCTTGAACCCAACACTCCCCAAGGAGCAAGTGAGTTTAGCTGAATGGGCTGCACACTGCTACAACAAAGGAATTTTAGATCAGATAATCGACACATTCCTTAAAGGGAAGATCGCATCAGAATGTCTCAAGAAGTTCGCTGAGACAGCAATGAAATGTGTGTCTGATCAGGGAATCGACAGGCCATCGATGGGCGATGTTCTCTGGAATCTAGAGTTTGCATTGCAGCTGCAGGAGAGCGCAGAAGAGAGTGGCAAGGTAGGCAGTGGGATGGATGTGGAAGAAGGTCAACTGGATGTAGTTTACAAAGGGAAGAAGGATCCAGATGCTTCCCCCGGCATTGATGGAAACATAACCGACTCAAGAAGCACCGGAATCAGTATGAGCATTGGAAGCCGAAGTCTTGCCAGTGAAGATTCAGATGGGTTGACGCCAAGTGCTGTCTTCTCACAGATCATGAACCCAAAAGGGCGTTAA 2694 43.28 MKEIRGLAFTFAFASISVFVSLFFDVHVVLAQNYIPRDVILLDCGGPSTANDIDSRKWNTDDKSKFVPAAGDSTVSKAATQDPSVPDIPFMTARVFSSNFTYSFPVAPSRLFVRLYFYPSSYGGLDASDALFSVSTQSYTLLKNFSASQTAAALNYAYIIKEYSIHVDDDRLNLTFIPSSTHPKAYAFVNGIEIVSMPDIYSDTSGSTLIVGPSTPFTVDNSTALENVYRLNVGGNDISPSVDTGMYRSWFDDTPFLYGAAQGVTMSTDQNTTLNYPPGFPTYVAPENVYSTARAMGPDNNVNLNYNLTWIFPVDSEFFYLVRLHFCEIAANITKINQRVFDIFLYNKTAMDSADVIAWAGSNDTPLYKDYVVFVPANGNPQQDLWLELHPDKTMLPNYYDAILNGVEIFKINDSNANLAGLNPIPAPKQEIIDPSLAKPASHGKSKNNSGVIAGVVCGAVVLALIIGFFVFAKRRRGRGKDSSTVEGPSGWLPLSLYGNSHSAGSAKTNTTGSYTSSLPSNLCRHFSFSEIKAATRDFDESLLLGVGGFGKVYKGEIDGGTTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTLREHLYKTHKPPLSWRQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDHTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPALNPTLPKEQVSLAEWAAHCYNKGILDQIIDTFLKGKIASECLKKFAETAMKCVSDQGIDRPSMGDVLWNLEFALQLQESAEESGKVGSGMDVEEGQLDVVYKGKKDPDASPGIDGNITDSRSTGISMSIGSRSLASEDSDGLTPSAVFSQIMNPKGR 897
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 26526109 26530385 - MELO3C025229.2.1 Cme08g02094 336357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g02094 897 SUPERFAMILY Protein kinase-like (PK-like) 512 812 IPR011009 -
Cme08g02094 897 MobiDBLite consensus disorder prediction 843 897 - -
Cme08g02094 897 CDD STKc_IRAK 545 811 - -
Cme08g02094 897 SMART serkin_6 539 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme08g02094 897 Gene3D Transferase(Phosphotransferase) domain 1 616 831 - -
Cme08g02094 897 ProSitePatterns Serine/Threonine protein kinases active-site signature. 660 672 IPR008271 GO:0004672|GO:0006468
Cme08g02094 897 Pfam Protein tyrosine and serine/threonine kinase 545 807 IPR001245 GO:0004672|GO:0006468
Cme08g02094 897 PANTHER OS07G0166700 PROTEIN 24 863 IPR045272 GO:0004714|GO:0006468
Cme08g02094 897 ProSitePatterns Protein kinases ATP-binding region signature. 545 568 IPR017441 GO:0005524
Cme08g02094 897 Gene3D - 224 413 - -
Cme08g02094 897 Gene3D - 38 197 - -
Cme08g02094 897 Gene3D Phosphorylase Kinase; domain 1 524 615 - -
Cme08g02094 897 MobiDBLite consensus disorder prediction 855 890 - -
Cme08g02094 897 ProSiteProfiles Protein kinase domain profile. 539 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme08g02094 897 PANTHER - 24 863 - -
Cme08g02094 897 Pfam Malectin-like domain 42 412 IPR024788 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme05g01796 Cme-Chr5:26890858 Cme08g02094 Cme-Chr8:26526109 0 dispersed
Cme07g00994 Cme-Chr7:11106530 Cme08g02094 Cme-Chr8:26526109 0 dispersed
Cme07g01000 Cme-Chr7:11161483 Cme08g02094 Cme-Chr8:26526109 0 dispersed
Cme08g00078 Cme-Chr8:532284 Cme08g02094 Cme-Chr8:26526109 0 dispersed
Cme08g02094 Cme-Chr8:26526109 Cme11g01730 Cme-Chr11:25460130 0 dispersed
Cme09g00206 Cme-Chr9:1625642 Cme08g02094 Cme-Chr8:26526109 2.13E-49 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65115 PF12819 Malectin_like 4.50E-40 CL0202 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g02094 - - csv:101211171 1764.59