Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g02207 AAAAAAAAAAGAAAAAAAAAAAACTCTCTCAAATCTTTTTACGCTTTCATACACAAACAAACAACATCCCCAGCTATAATTCACACCCATTACTTGACCTACAAATTCCTCCCTTCTCTCATAACCAAATATCCATTAATTAATAATCCCCCCGATCTTTTTCGGAATTTAATCTCCGCCATGGAAGATTTTTGCGATCTTCGCCGTGCTGTTCGTCTTCATCGAATCGCTGGCGTTAATGCGGATCAGGCGGCGGGGGATAGGTTTCCGCCGTGGAGTGTACTGGAGACGAAGGAATTGCTTGCGATTAGAGCGGCGTTGGATAAGAATTTCTCGGAGATGAAACAGAATAGAATGCTTTGGATTTCGGTGGCCGGAAAGATGAAGGCTAAAGGCTTTAATCGAAGCGACGAGCAGTGTAAATGTAAATGGAAAAATCTTGTCACTCGTTATAAGGGTTGTGAAACTATGGATCCCAAAGCTCTAAAGCATCAATTTCCATTTTACGACGACCTTCATACAATTTTTACTGCAAGGATGCAAAAGAATTGGTGGGTCGAAGCCGAAAACCGATCTGGAGTCTTGAAAAGGAAAGCAAACGAGGATCCGAATGGTGATAGAGAATTAGAAAACGAAGAAAAAACAAAAACGAAAAATGTCACAAAAAAGAGGAAATGGAAAAGGGATAATGATCTTGAAGAACATGAGAGGAATTTGGAGGAAATATTGAAGGGTTTTCTGAAAAGAGAGATGGAAATGGAGAGGGAATGGAGAGAAGCATTTAGGGTTAGAGAAGAAGAGAGAAGGTTAAAAGAGGAAGAATGGAGAATGAAAATGGAAGGTATTGAGAGAGAGAAGATGACGATGGAGATATTATGGAGAGAAAATGAAGAAAAGAGAAGAGAAAGAGAAGAAGCAAGAGCTCAGAAAACAGATGCTTTGATCTCTGCTTTGTTGACCAACCTCACGTAA 972 39.81 KKKRKKKNSLKSFYAFIHKQTTSPAIIHTHYLTYKFLPSLITKYPLINNPPDLFRNLISAMEDFCDLRRAVRLHRIAGVNADQAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRMLWISVAGKMKAKGFNRSDEQCKCKWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARMQKNWWVEAENRSGVLKRKANEDPNGDRELENEEKTKTKNVTKKRKWKRDNDLEEHERNLEEILKGFLKREMEMEREWREAFRVREEERRLKEEEWRMKMEGIEREKMTMEILWRENEEKRREREEARAQKTDALISALLTNLT 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 28103645 28106265 - MELO3C025995.2.1 Cme08g02207 336470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g02207 323 PANTHER - 61 323 - -
Cme08g02207 323 MobiDBLite consensus disorder prediction 196 221 - -
Cme08g02207 323 ProSiteProfiles Myb-like domain profile. 91 148 IPR001005 -
Cme08g02207 323 Gene3D - 92 153 - -
Cme08g02207 323 Coils Coil 289 316 - -
Cme08g02207 323 Pfam Myb/SANT-like DNA-binding domain 91 174 IPR044822 -
Cme08g02207 323 CDD GT1 92 155 - -
Cme08g02207 323 PANTHER - 61 323 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme04g02727 Cme08g02207 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g02188 Cme-Chr3:28871494 Cme08g02207 Cme-Chr8:28103645 3.12E-10 dispersed
Cme07g01516 Cme-Chr7:21010443 Cme08g02207 Cme-Chr8:28103645 2.14E-17 dispersed
Cme04g02727 Cme-Chr4:32646707 Cme08g02207 Cme-Chr8:28103645 4.38E-49 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
41877 PF13837 Myb_DNA-bind_4 1.20E-17 CL0123 Cme TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g02207 - - cmo:103502137 464.151