Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g02295 ATGGCATTTGCTCACTTTCAACAGAAGAACGGTTCAGTGGAGAGTTTGTGCATTGGCCCTAACGATCCACTCAATTGGGGTGTGGCTGCTGACTCTTTCAAGGGAAGCCATCTCGATGAGGTGAAGCGCATGGTTGAGGAGTATCGGAGGCCCATTGTCAAGCTTGGTGGTGAAACTCTTACTATTTCTCAAGTGGCTGCTATTGCTACTCGGGATTCTGATGTTATTGTTGAGCTTTATAAGTCTGCTAGAGCTGGTGTTAAGGCTAGTAGTGATTGGGTTATGGAGAGCATGAACAAAGGGACCGATAGTTATGGTGTTACTACTGGATTTGGTGCTACTTCTCATAGAGGGACCAAACAAGGTGGTGCTCTTCAAAAAGAGTTGATTAGATTTTTAAATTCGGGAATTTTCGGAAGTGGAGCTGAGTCTGATCATACTTTGCCCCATTCAGCTACTAGAGCGGCCATGTTGGTGAGAATCAACACTCTTCTTCAAGGCTACTCGGGTATTAGATTTGAGATTTTGGAAGCGATAACCAAACTTTTGAACCATAATATAACTTCGTGCTTGCCTCTCCGTGGAACAATTACTGCTTCTGGAGATCTTGTTCCTCTTTCTTACATTGCTGGATTGCTCACTGGGCGACCCAACTCCAAGGCCATTGGACCAAATGGAGAACGTATTAATGCCAAGGAGGCTTTCCAACAAGCCGATATTCCTTCTGGGTTCTTTGAATTGCAACCTAAGGAAGGTCTTGCTCTTGTTAATGGTACTGCTGTTGGTTCTGGATTGGCTTCTATTGTTCTCTTTGAGGCAAATATTTTGGTCGTTTTGTCCGAGATTCTTTCTGCTATTTTTGCTGAGGTCATGCAAGGAAAGCCTTAA 888 44.03 MAFAHFQQKNGSVESLCIGPNDPLNWGVAADSFKGSHLDEVKRMVEEYRRPIVKLGGETLTISQVAAIATRDSDVIVELYKSARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRGTKQGGALQKELIRFLNSGIFGSGAESDHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNHNITSCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAIGPNGERINAKEAFQQADIPSGFFELQPKEGLALVNGTAVGSGLASIVLFEANILVVLSEILSAIFAEVMQGKP 295
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 29957701 29958588 + MELO3C014225.2.1 Cme08g02295 336558
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cme08g02295 295 Pfam Aromatic amino acid lyase 60 294 IPR001106 -
Cme08g02295 295 PANTHER HISTIDINE AMMONIA-LYASE 9 295 IPR001106 -
Cme08g02295 295 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 195 211 IPR022313 GO:0016841
Cme08g02295 295 PANTHER PHENYLALANINE AMMONIA-LYASE 9 295 - -
Cme08g02295 295 SUPERFAMILY L-aspartase-like 22 294 IPR008948 GO:0003824
Cme08g02295 295 Gene3D - 15 259 IPR024083 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g02295 Cme-Chr8:29957701 Cme08g02297 Cme-Chr8:29961856 0 dispersed
Cme08g02294 Cme-Chr8:29952626 Cme08g02295 Cme-Chr8:29957701 0 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g02295 K10775 - csv:101218617 549.28