Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme08g02295 | ATGGCATTTGCTCACTTTCAACAGAAGAACGGTTCAGTGGAGAGTTTGTGCATTGGCCCTAACGATCCACTCAATTGGGGTGTGGCTGCTGACTCTTTCAAGGGAAGCCATCTCGATGAGGTGAAGCGCATGGTTGAGGAGTATCGGAGGCCCATTGTCAAGCTTGGTGGTGAAACTCTTACTATTTCTCAAGTGGCTGCTATTGCTACTCGGGATTCTGATGTTATTGTTGAGCTTTATAAGTCTGCTAGAGCTGGTGTTAAGGCTAGTAGTGATTGGGTTATGGAGAGCATGAACAAAGGGACCGATAGTTATGGTGTTACTACTGGATTTGGTGCTACTTCTCATAGAGGGACCAAACAAGGTGGTGCTCTTCAAAAAGAGTTGATTAGATTTTTAAATTCGGGAATTTTCGGAAGTGGAGCTGAGTCTGATCATACTTTGCCCCATTCAGCTACTAGAGCGGCCATGTTGGTGAGAATCAACACTCTTCTTCAAGGCTACTCGGGTATTAGATTTGAGATTTTGGAAGCGATAACCAAACTTTTGAACCATAATATAACTTCGTGCTTGCCTCTCCGTGGAACAATTACTGCTTCTGGAGATCTTGTTCCTCTTTCTTACATTGCTGGATTGCTCACTGGGCGACCCAACTCCAAGGCCATTGGACCAAATGGAGAACGTATTAATGCCAAGGAGGCTTTCCAACAAGCCGATATTCCTTCTGGGTTCTTTGAATTGCAACCTAAGGAAGGTCTTGCTCTTGTTAATGGTACTGCTGTTGGTTCTGGATTGGCTTCTATTGTTCTCTTTGAGGCAAATATTTTGGTCGTTTTGTCCGAGATTCTTTCTGCTATTTTTGCTGAGGTCATGCAAGGAAAGCCTTAA | 888 | 44.03 | MAFAHFQQKNGSVESLCIGPNDPLNWGVAADSFKGSHLDEVKRMVEEYRRPIVKLGGETLTISQVAAIATRDSDVIVELYKSARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRGTKQGGALQKELIRFLNSGIFGSGAESDHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNHNITSCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAIGPNGERINAKEAFQQADIPSGFFELQPKEGLALVNGTAVGSGLASIVLFEANILVVLSEILSAIFAEVMQGKP | 295 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 29957701 | 29958588 | + | MELO3C014225.2.1 | Cme08g02295 | 336558 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme08g02295 | 295 | Pfam | Aromatic amino acid lyase | 60 | 294 | IPR001106 | - | |
| Cme08g02295 | 295 | PANTHER | HISTIDINE AMMONIA-LYASE | 9 | 295 | IPR001106 | - | |
| Cme08g02295 | 295 | ProSitePatterns | Phenylalanine and histidine ammonia-lyases signature. | 195 | 211 | IPR022313 | GO:0016841 | |
| Cme08g02295 | 295 | PANTHER | PHENYLALANINE AMMONIA-LYASE | 9 | 295 | - | - | |
| Cme08g02295 | 295 | SUPERFAMILY | L-aspartase-like | 22 | 294 | IPR008948 | GO:0003824 | |
| Cme08g02295 | 295 | Gene3D | - | 15 | 259 | IPR024083 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme08g02295 | Cme-Chr8:29957701 | Cme08g02297 | Cme-Chr8:29961856 | 0 | dispersed | |
| Cme08g02294 | Cme-Chr8:29952626 | Cme08g02295 | Cme-Chr8:29957701 | 0 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme08g02295 | K10775 | - | csv:101218617 | 549.28 |