Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme08g02307 | ATGGAGACCAATGACCACAATAAGGTTATTCTGATCAATGGCGAAGCTGAGAGGAGGAGGAACAGACGGAGAAGGAAAGGGTTGGGGATATTGTCTTGTAATTCTGATGAAGATTATGATCATGAGGTGAAGGGAATGATACTAGATCCAACTTTGCCCATATTAAACAAATGGAATAGGGTTTTTCTAGTGGCTTCTCTAGTCTCACTATTTGTTGACCCCATCTTCTTTTTCCTACCGGTGGTGAACGCGGAGGACGGGTGCATCCAAATGAGTGCAGAATTGGGTGTGGCGTTGACAGTGGTCCGATCCATGGCGGATGTGTTCTACGTAGCACACATACTCATTAGGTTTAGGACAGCTTATGTAGCTCCCTCCTCCAGAATCTTTGGGAGAGGAGACCTCGTGATTCACCCTTCTAAGATCGCAGCAAACTATCTTGGTTGCGAGTTTTGGCTTCATTTTGCTGCTGCATTACCTCTTCCACAGTACATGTTGAGGTTGTATCTCATCTTCCCTTTATCTGATCAAATCATTAAGGCCACTGGAGTTCTGATGAAAACAGCTTGGGTTGGAGCTGTTTATAACCTAATGCTCTTTATGCTAGCAAGCCATGTCTTGGGGTCGTGTTGGTACCTTTTATCCATAGGAAGACAAATGGAATGCTGGAAAAAAGTGTGCAATTTGGGGCATTACTTGGGTTGTGAATATGAGCATTTTTATTGTAAAGCTGCACAGCAAAGAGATCATCCTGCTTGGTGGTTTCAAATTAAAGCAACCAATATCTCAAATTTATGTAATCCAAGTGCTACCAGTTTCTTCAACTTTGGGATTTTTTCAGATTCTTTTGCTTCAACTTCTTCCCCCTTCATCACTAGCTCTCTAGGACAAAATTTGCTAACAAGTAGCAACGTGGGAGAAATCAATTTCGCTATTGTCATTGCCATTCTTGGGTTGGTGCTTTTTGCTCTTCTCATTGGAAATATGCAAACATATCTCCAATCAACAACATTAAGACTAGAAGAATGGAGAAGAAGAAGAAGAGACACGGAGCAATGGATGCAACACAGACAATTACCAAATCAATTGAAACAATGTGTAAGAAATTATGAACAATTTCGATGGATAGCAACCCACGGCGTCGACGAACAACAAATTCTAAAGTCCCTTCCTCTCGATCTCCGACGACACATCAAACGCCATCTCTGTTTAGATCTCCTCCGTCAAGTTCCTCTGCTAGACGAAATGGAAGAAACAATGTTAGACGCTATTTGCGAGCGATTAAACCCCTATTTAATCACTTCCAACACCTATTTAATTCGAGAAGGTGACCCGGTTAACGAAATGTTGTTCATAATCCGTGGGTATTTGGATTCCCACACCACCAACGGCGGCCGGACTGGGTTCTTCAACTCAAGCCGCCTCGGGCCGAGTGATTTCTGCGGTGAGGAGTTGCTACCTTGGGCTCTGGTTGATGATCCTAGGGCCGCAGCGGTGTTCCCGTCGTCAACCAGGACGGTGAAGGCGGTGACGGAAGTGGAAGGGTTCGCGCTTGTGGCGGAGGATTTGAAGTTTGTGGCGGCGCAATTTCGGAAGCTGCATAGTAAACAGATTAGGAGTACGTTTAGGTTTTATTCGCATCAATGGCGAACTTGGGCGGCGTGTTTCATTCAGGCGGCGTGGTTTAGGTATAAGCGGCGGATGAAGAAGGAGGAAGAAGATGAGATTAATGTTGCGAGGAAGATGAATGTTGTTCATCATAGGTCGTTGGTGAAGCCACTTCAACTTGATTTCTCTGTTGAACATAGATGA | 1812 | 44.37 | METNDHNKVILINGEAERRRNRRRRKGLGILSCNSDEDYDHEVKGMILDPTLPILNKWNRVFLVASLVSLFVDPIFFFLPVVNAEDGCIQMSAELGVALTVVRSMADVFYVAHILIRFRTAYVAPSSRIFGRGDLVIHPSKIAANYLGCEFWLHFAAALPLPQYMLRLYLIFPLSDQIIKATGVLMKTAWVGAVYNLMLFMLASHVLGSCWYLLSIGRQMECWKKVCNLGHYLGCEYEHFYCKAAQQRDHPAWWFQIKATNISNLCNPSATSFFNFGIFSDSFASTSSPFITSSLGQNLLTSSNVGEINFAIVIAILGLVLFALLIGNMQTYLQSTTLRLEEWRRRRRDTEQWMQHRQLPNQLKQCVRNYEQFRWIATHGVDEQQILKSLPLDLRRHIKRHLCLDLLRQVPLLDEMEETMLDAICERLNPYLITSNTYLIREGDPVNEMLFIIRGYLDSHTTNGGRTGFFNSSRLGPSDFCGEELLPWALVDDPRAAAVFPSSTRTVKAVTEVEGFALVAEDLKFVAAQFRKLHSKQIRSTFRFYSHQWRTWAACFIQAAWFRYKRRMKKEEEDEINVARKMNVVHHRSLVKPLQLDFSVEHR | 603 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 30063052 | 30066595 | - | MELO3C014236.2.1 | Cme08g02307 | 336570 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme08g02307 | 603 | SUPERFAMILY | Voltage-gated potassium channels | 57 | 334 | - | - | |
Cme08g02307 | 603 | Pfam | Ion transport protein | 58 | 339 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
Cme08g02307 | 603 | PANTHER | PROTEIN CNGC15A | 23 | 164 | - | - | |
Cme08g02307 | 603 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 163 | 581 | - | - | |
Cme08g02307 | 603 | SMART | cnmp_10 | 412 | 545 | IPR000595 | - | |
Cme08g02307 | 603 | Gene3D | Helix hairpin bin | 340 | 403 | - | - | |
Cme08g02307 | 603 | Gene3D | Jelly Rolls | 410 | 532 | IPR014710 | - | |
Cme08g02307 | 603 | SUPERFAMILY | cAMP-binding domain-like | 341 | 535 | IPR018490 | - | |
Cme08g02307 | 603 | PANTHER | PROTEIN CNGC15A | 163 | 581 | - | - | |
Cme08g02307 | 603 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 412 | 499 | IPR000595 | - | |
Cme08g02307 | 603 | PRINTS | EAG/ELK/ERG potassium channel family signature | 202 | 212 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cme08g02307 | 603 | PRINTS | EAG/ELK/ERG potassium channel family signature | 325 | 334 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cme08g02307 | 603 | PRINTS | EAG/ELK/ERG potassium channel family signature | 307 | 318 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cme08g02307 | 603 | PRINTS | EAG/ELK/ERG potassium channel family signature | 114 | 123 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cme08g02307 | 603 | PRINTS | EAG/ELK/ERG potassium channel family signature | 375 | 382 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cme08g02307 | 603 | CDD | CAP_ED | 412 | 545 | IPR000595 | - | |
Cme08g02307 | 603 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 23 | 164 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme08g02307 | Cme-Chr8:30063052 | Cme11g01806 | Cme-Chr11:26249176 | 0 | dispersed | |
Cme08g02307 | Cme-Chr8:30063052 | Cme04g01904 | Cme-Chr4:26747348 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme08g02307 | K05391 | - | csv:101221856 | 1111.67 |