Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme08g02311 | ATGCCGAAGGATATTGAAGCTGGAGGGCATGGTGGGTTTAGTGGGAAGGATTACGAAGACCCACCGCCTGCGCCGTTGATCGACGCACATGAGTTTGCTAAGTGGTCATTTTACAGAGCCATTATAGCTGAGTTTGTTGCTACTCTTTTGTTCTTGTATGTTACTGTTCTTACCGTTATTGGGTATAAAGTTCAGAGTGATGTTAAGAATGGAGGGGAGATTTGTGGCGGCGTTGGAATTTTGGGTATTGCTTGGGCCTTTGGTGGCATGATTTTTGTCCTCGTTTACTGCACCGCGGGGATTTCTGGGGGACATATAAATCCGGCGGTGACTTTTGGGCTGTTTTTGGCTCGTAAGGTGTCGTTGGTGAGAGCCATATTGTACGTGGCGGCTCAGAGTTTAGGCGCCATTTGTGGCTGTGCATTGGTGAAGGCGTTCCAAAACGGTCATTACACCGAGTACGGTGGTGGAGCCAATTCCCTCGCCGACGGCTACAGCACCGGCACTGGATTAGCCGCTGAGATCATCGGAACCTTCGTTCTCGTTTACACTGTCTTTTCCGCCACCGATCCCAAAAGAAATGCCAGAGACTCCCACGTCCCCGTTTTGGCGCCACTTCCAATTGGGTTCGCGGTGTTCATGGTTCATTTGGCCACGATTCCAATCACCGGAACCGGCATCAACCCAGCTCGAAGCTTTGGAGCTGCAGTTGTGTTCAACCGATCCAAGCCATGGGATGATCAATGGATATTTTGGGTTGGACCTTTCATTGGAGCTGCCATAGCTGCAATTTATCATCAATTCGTATTAAGAGCAGGAGCAGCAAAAGCTCTAGGATCGTTCTCAAGTTCTTGA | 855 | 49.59 | MPKDIEAGGHGGFSGKDYEDPPPAPLIDAHEFAKWSFYRAIIAEFVATLLFLYVTVLTVIGYKVQSDVKNGGEICGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYVAAQSLGAICGCALVKAFQNGHYTEYGGGANSLADGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVVFNRSKPWDDQWIFWVGPFIGAAIAAIYHQFVLRAGAAKALGSFSSS | 284 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 30088714 | 30090280 | - | MELO3C014240.2.1 | Cme08g02311 | 336574 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme08g02311 | 284 | ProSitePatterns | MIP family signature. | 105 | 113 | IPR022357 | - | |
Cme08g02311 | 284 | Gene3D | Glycerol uptake facilitator protein. | 24 | 284 | IPR023271 | - | |
Cme08g02311 | 284 | PRINTS | Major intrinsic protein family signature | 39 | 58 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme08g02311 | 284 | PRINTS | Major intrinsic protein family signature | 87 | 111 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme08g02311 | 284 | PRINTS | Major intrinsic protein family signature | 124 | 143 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme08g02311 | 284 | PRINTS | Major intrinsic protein family signature | 173 | 191 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme08g02311 | 284 | PRINTS | Major intrinsic protein family signature | 209 | 231 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme08g02311 | 284 | PRINTS | Major intrinsic protein family signature | 249 | 269 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme08g02311 | 284 | SUPERFAMILY | Aquaporin-like | 30 | 271 | IPR023271 | - | |
Cme08g02311 | 284 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Cme08g02311 | 284 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 2 | 283 | IPR034294 | - | |
Cme08g02311 | 284 | Pfam | Major intrinsic protein | 32 | 266 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme08g02311 | 284 | CDD | MIP | 39 | 269 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme08g02311 | 284 | PANTHER | AQUAPORIN PIP2-1-RELATED | 2 | 283 | - | - | |
Cme08g02311 | 284 | TIGRFAM | MIP: MIP family channel proteins | 43 | 265 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme08g02311 | Cme-Chr8:30088714 | Cme11g01798 | Cme-Chr11:26126094 | 1.11E-168 | dispersed | |
Cme08g02310 | Cme-Chr8:30084894 | Cme08g02311 | Cme-Chr8:30088714 | 0 | tandem | |
Cme08g02311 | Cme-Chr8:30088714 | Cme08g02312 | Cme-Chr8:30098090 | 4.82E-179 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme08g02311 | K09872 | - | csv:101216085 | 549.28 |