Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g02323 ATGTCCCTTGGGGGCTCAATTAAAATTGTGTTTCTTCTATTATCTTTCCTCCTCCTTTCCAATTTTGGGAAAAGCCAAGAACTTGTGGTGAATTACTACAACCAAAGTTGCCCACAAGCTGAGGAAATAATCAAACAACAAGTTTTTTCCTTGTACCAAAAACATGGAAATTCAGCCATTTCGTGGATTAGAAATCTCTTCCATGATTGCATGGTCAAGTCATGTGATGCATCTCTTTTATTAGAGATGAAAAATGAAGAAGGTGTAGTTATATCAGAAATGAAGTCACCAAGAAGCTTCGGGATAAGAAATCTTAAGTATGTTAACAAAATCAAACAAGTCCTTGAGAATGAATGTCCCAACACTGTCTCTTGTGCTGATATTATGGCTCTCGCCGCAAGAGATGCTATTGTTCTGGTAATTAAGATGGAAATGAAAACAGGAAGAAGAGATAGCAAAGAGAGCTACGGAGAAATGGTGGAAGAGTTTATACCAAATCACAATGACTCACTTTCATTGGTTCTTTCTCGCTTTCAAGATATTGGCATTGATGCTGAAGCTACCGTTGCTCTTTTAGGAGCTCACTCGATGGGTCGAGTCCACTGTGTAAACTTAGTGAACCGGCTCTATCCGACCGTGGACCCGACTTTGGATCCGAACCACGCATTGTATCTTAAAAAAAGGTGCCCAAACCCGAACCCGGACCCGAAGGCAGTCCAGTACGCGAGAAACGATTTGGAATCGCCATTGGTGGTGGATAACAACTACTACAGAAACGTATTGGACCACAAGGCCCTTTTGTTAGTGGACCAGCAATTGGGCTCAAGCCCAATAACTCTTCCTTATGTCCAACAAATGGCCTCCAATAACACCTACTTTCTGGCCCAATTTGCTAGGGCTTTGCTCTTGCTGTCTGAGAATAACCCTCTCACGGATGACCAAGGAGAGATAAGAAAGGATTGTCGACGAATCAACAAATGA 981 42.1 MSLGGSIKIVFLLLSFLLLSNFGKSQELVVNYYNQSCPQAEEIIKQQVFSLYQKHGNSAISWIRNLFHDCMVKSCDASLLLEMKNEEGVVISEMKSPRSFGIRNLKYVNKIKQVLENECPNTVSCADIMALAARDAIVLVIKMEMKTGRRDSKESYGEMVEEFIPNHNDSLSLVLSRFQDIGIDAEATVALLGAHSMGRVHCVNLVNRLYPTVDPTLDPNHALYLKKRCPNPNPDPKAVQYARNDLESPLVVDNNYYRNVLDHKALLLVDQQLGSSPITLPYVQQMASNNTYFLAQFARALLLLSENNPLTDDQGEIRKDCRRINK 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 30160368 30163850 + MELO3C014252.2.1 Cme08g02323 336586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g02323 326 SUPERFAMILY Heme-dependent peroxidases 28 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme08g02323 326 Gene3D - 31 325 - -
Cme08g02323 326 ProSiteProfiles Plant heme peroxidase family profile. 27 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme08g02323 326 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme08g02323 326 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme08g02323 326 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme08g02323 326 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme08g02323 326 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme08g02323 326 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme08g02323 326 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme08g02323 326 PANTHER PEROXIDASE 25-RELATED 16 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme08g02323 326 Gene3D Peroxidase, domain 2 165 304 - -
Cme08g02323 326 Pfam Peroxidase 45 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme08g02323 326 CDD secretory_peroxidase 27 324 IPR033905 GO:0004601|GO:0042744
Cme08g02323 326 PANTHER PEROXIDASE 21 16 323 - -
Cme08g02323 326 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme08g02323 326 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme08g02323 326 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme08g02323 326 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme04g02541 Cme08g02323 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g02323 Cme-Chr8:30160368 Cme12g01489 Cme-Chr12:22519596 2.32E-126 dispersed
Cme04g02541 Cme-Chr4:31630075 Cme08g02323 Cme-Chr8:30160368 6.18E-152 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g02323 K00430 - csv:101221151 613.609