Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme08g02377 | ATGAATTCCCAAGTTAGCCAATGGTGTGTCTCAGCCAAGCCTTTTTTTGCTGTAGTGTTCTTGCAGTTTGGTCTTGCAGGAATGGACATTCTATCTAAAGCAGCTCTGAACCAAGGAATGAGCAACTATGTTCTAGTTGTTTATCGCCATGCAGTTGCCACAATTGTTATAGCTCCTTTTGCACTGATTTTTGACAAGCCTGTGATTGATCAAAACTTATATTTCTTGGGAATGAAGTACACAACAGCAACTTTTGCAGCTGCCATGTGCAATATTCTTCCTGCCATTACCTTTGTAATGGCTTGGATTCTCAGGCTTGAGAAAGTAAGAATCAAAAGCATCAGAAGCCAAGCTAAGATAGTGGGAACCGTAGCAACAGTCGGAGGAGCTATGATAATGACACTAATGAAAGGTCCAATTTTAGAGCTATTTTGGGTTAAAGAAAGAGGAACCAACCCACAACAAAGCGGTGAAATCAGCCTTCAACATACAATCAAAGGTTCGATTATGATCACAATTGGTTGCTTCAGTTGGGCGTGTTTCATGATTCTTCAGGCAATAACATTGAAGGCTTACCCAGCTGAACTCTCTCTTACGGCATGGATTTGCTTATTGGGAACTGCGGAGGGAACTGTGGTGGCTTTAGTGATGGAAAGAGGAAACCCCGCCGTTTGGTCCATTACTTGGGGAACTAAATTACTCGCCGCCGTTTATAGTGGGATATTTTGTTCGGGACTTGCTTATTACATTCAAGGACTAGTGATGAAAGACAAAGGACCTGTTTTTGTGACTGCCTTTAGTCCATTAAGTATGGTCATTGTAGCCATTATGAGTTCCTTTATTCTAGGCGAACGTCTCTACTTTGGAAGGGTACTTGGAGCTGTTGTGATAATTGTGGGACTATACCTTGTTGTTTGGGGCAAAAACAAAGATGAGAATTGTTCCTCAAATGAAGACTTGAAATTACCCACAAAACAAACAATTGAAGACAACAAGATGGAAAGTTTAACAATTGAACCAAATATTTGTGTTGATTTAAAGAATATTGAGCAAAAATGA | 1059 | 40.23 | MNSQVSQWCVSAKPFFAVVFLQFGLAGMDILSKAALNQGMSNYVLVVYRHAVATIVIAPFALIFDKPVIDQNLYFLGMKYTTATFAAAMCNILPAITFVMAWILRLEKVRIKSIRSQAKIVGTVATVGGAMIMTLMKGPILELFWVKERGTNPQQSGEISLQHTIKGSIMITIGCFSWACFMILQAITLKAYPAELSLTAWICLLGTAEGTVVALVMERGNPAVWSITWGTKLLAAVYSGIFCSGLAYYIQGLVMKDKGPVFVTAFSPLSMVIVAIMSSFILGERLYFGRVLGAVVIIVGLYLVVWGKNKDENCSSNEDLKLPTKQTIEDNKMESLTIEPNICVDLKNIEQK | 352 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 30644568 | 30647359 | - | MELO3C003105.2.1 | Cme08g02377 | 336640 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme08g02377 | 352 | PANTHER | WAT1-RELATED PROTEIN | 67 | 325 | - | - | |
| Cme08g02377 | 352 | PANTHER | WAT1-RELATED PROTEIN | 9 | 66 | - | - | |
| Cme08g02377 | 352 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 48 | 135 | - | - | |
| Cme08g02377 | 352 | Pfam | EamA-like transporter family | 166 | 305 | IPR000620 | GO:0016020|GO:0016021 | |
| Cme08g02377 | 352 | PANTHER | WAT1-RELATED PROTEIN | 67 | 325 | IPR030184 | GO:0016021|GO:0022857 | |
| Cme08g02377 | 352 | PANTHER | WAT1-RELATED PROTEIN | 9 | 66 | IPR030184 | GO:0016021|GO:0022857 | |
| Cme08g02377 | 352 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 224 | 310 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme08g02377 | Cme-Chr8:30644568 | Cme10g00878 | Cme-Chr10:6168596 | 3.08E-126 | dispersed | |
| Cme03g00574 | Cme-Chr3:8965872 | Cme08g02377 | Cme-Chr8:30644568 | 3.24E-110 | transposed | |
| Cme07g00859 | Cme-Chr7:8550197 | Cme08g02377 | Cme-Chr8:30644568 | 1.01E-116 | transposed | |
| Cme08g01439 | Cme-Chr8:12876104 | Cme08g02377 | Cme-Chr8:30644568 | 1.90E-101 | transposed | |
| Cme10g00733 | Cme-Chr10:4653085 | Cme08g02377 | Cme-Chr8:30644568 | 2.70E-108 | transposed | |
| Cme10g00877 | Cme-Chr10:6138411 | Cme08g02377 | Cme-Chr8:30644568 | 1.05E-135 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme08g02377 | - | - | csv:101217902 | 653.669 |