Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g02387 ATGAACATAAGCTCCATCAAAACTGCCTCCAATGGCATATGGCAAGGTGACAATCCTCTCCATTTCGCCTTCCCTCTCTTAATCCTTCAATCCGTTCTCATCCTCGTTCTCACTCGCTTCCTCGCCCTCCTCCTCAAACCCCTCCGTCAACCCAAAGTCATCGCCGAGATCGTCGGTGGGATTCTACTGGGTCCATCCGCTTTCGGACGTAACAAAACTTATTTAAACCACATTTTCCCCTCATGGAGTACTCCCATTCTCGAATCAGTCGCCAGTATTGGTCTGTTGTTCTTCCTCTTCCTCGTTGGACTCGAACTCGATTTGTCCTCCATTCGTCGTAGCGGTAAACGAGCATTTGGAATTGCTCTAGCGGGAATCTCCGTCCCATTCTTTTCTGGCATAGGTGTCGCCTTCGTCCTGCGTAAAACCGTCGATGGCGCTGACAAAGTTGGTTACGGTCAGTTCATTGTATTCATGGGTGTCGCTCTATCCATCACTGCTTTTCCTGTTTTAGCTCGCATTTTAGCAGAGCTAAAGCTCCTCACAACCCAAGTTGGGGAAACAGCTATGGCCGCCGCCGCATTCAACGACGTAGCCGCTTGGATCCTCCTGGCACTCGCCGTTGCCTTAGCCGGCAACGGCGGCGAAGGCGGATCCGAGAAGAGTCCATTGGTTTCTGTGTGGGTGTTACTTTCAGGAGCCGGGTTTGTGGTTTTCATGATGGTGGTCACTCGTCCCGGAATGAAATGGGTGGCGCGTCGATGCACGTACGAGCACGACGCCGTAGACGAGGCGTATATCTGTTTGACATTGGTGGGGGTTTTGGTTTCGGGGTTTGTGACGGATTTGATCGGAATTCATTCCATTTTTGGGGGATTTATATTTGGATTGACGATTCCAAAAGGGGGAAGATTTGCAGAGAGATTGATTGAGAGAATTGAAGATTTCGTTTCGGGTCTTCTTCTTCCTCTGTATTTTGCTTCAAGTGGATTAAAGACGGATGTGGCCAAAATTAAAGGGGGGAAAGCTTGGGGGTTGTTGGCGCTGGTTATATCGACGGCGTGCGCCGGTAAGATTCTGGCGACGTTTGTGGCGGCGATGGTGTTTTTGATTCCGACGAGGGAGGCGCTGGCGTTGGGTGTGCTTATGAATACCAAGGGCTTGGTTGAACTCATTGTCCTCAATATTGGGAAGGAGAAAAAGGTTTTAAACGACGAAGTGTTCGCCATATTAGTGTTAATGGCACTATTCACAACATTCATCACCACCCCCACCGTGATGGCAGTTTACAAGCCAGCCCGAGGTGGCTCCACCCCACCTACCCACCGTAAACTTCGAGACCTCTCCGCCAATGACTCCCCCGTCGAGGACGAGCTCCGGATCCTCGCTTGTGTCCACAGCTCCGGCAACGTGCCGTCCCTCATCACACTGACCGAGTCAACTCGCAGCACCAAAAATTCCTCCCTCAAACTCTTCGTAATGCACTTGGTCGAACTCACCGAGCGATCCTCTTCCATCATGATGGTCCAACGCGCCCGCAAAAACGGCTTCCCTTTCTTCGCCCGGTTCCGCAAGGCCAGCGAGTGGCGAGACCAAATGGCTGCGGCCTTTCAGGCCTATAGCCAATTGGGCCGAGTCAAGGTTCGGCCCACTACGGCCGTCTCTTCCTTAGCTACCATGCATGAGGATATCTGCCACGTCGCGGATGACAAGAGGGTTACGATGATTATCTTGCCGTTTCATCGGAATTGGAGGGCATTTGGCGGCGGCGATGGGGCGGAGGAGGAGGTGGAGGAGAATGTGGGCCATGGTTGGAGAGTTGTGAACCAACGGGTTTTGAAGAATGCGCCTTGCTCTGTGGCGGTTCTTGTGGACCGGGGATTTGGGGCCGGTGTGGCCCAGACGCCTGGGCCTGGGCCTATGATTTGTGTGGGTCAAAGGATTTGTGTTTTGTTTTTTGGTGGGCCAGATGATCGGGAGGCGCTGGAGTTGGGTGGCCGGATGGCGGAGCATCCGGCGGTGAAGGTGACGGTGGTTAGGTTTCGGCCGTCGTCGGCGGATGGTATGGAGGGTAGTAATGTCATTTTGCGTCCGACGCACTCGAAATCAAGCGATAACCATTATAGCTTCATCACCACTCCGATCAACCGGGAAAAAGAAAAGGAACAAGATGAAACAGCATTGGCAGAATTCAAAAGCAAATGGGAAGCAACAGTTGAGTACAAAGAGAAGGAGGTCAGCAGCACAAACATGATAGTTGAAGGGGTGGTAGCCCTTGGGAAGGAAATGAGTTACGACCTAATAGTGGTCGGGAAAGGTCGGGTTCCCTCGAGCTTGGTGATGAAACTAGCGGACCGACCAGCGGAGCACGCAGAGTTGGGGCCAGTGGGAGACATATTGGCCAGCTCTGGCAAGGGAATAGTATCTTCAATATTAATAATTCAACAACATGGAGGAGGTGGCCACGTAGAAGAAACTCCAGTTTTGAAGATAGCACAATCCAATAAGAATGAGAATGAGTTGCCTATGTCAAATGATGGAACCTCAATTGATCATGTATAA 2562 51.64 MNISSIKTASNGIWQGDNPLHFAFPLLILQSVLILVLTRFLALLLKPLRQPKVIAEIVGGILLGPSAFGRNKTYLNHIFPSWSTPILESVASIGLLFFLFLVGLELDLSSIRRSGKRAFGIALAGISVPFFSGIGVAFVLRKTVDGADKVGYGQFIVFMGVALSITAFPVLARILAELKLLTTQVGETAMAAAAFNDVAAWILLALAVALAGNGGEGGSEKSPLVSVWVLLSGAGFVVFMMVVTRPGMKWVARRCTYEHDAVDEAYICLTLVGVLVSGFVTDLIGIHSIFGGFIFGLTIPKGGRFAERLIERIEDFVSGLLLPLYFASSGLKTDVAKIKGGKAWGLLALVISTACAGKILATFVAAMVFLIPTREALALGVLMNTKGLVELIVLNIGKEKKVLNDEVFAILVLMALFTTFITTPTVMAVYKPARGGSTPPTHRKLRDLSANDSPVEDELRILACVHSSGNVPSLITLTESTRSTKNSSLKLFVMHLVELTERSSSIMMVQRARKNGFPFFARFRKASEWRDQMAAAFQAYSQLGRVKVRPTTAVSSLATMHEDICHVADDKRVTMIILPFHRNWRAFGGGDGAEEEVEENVGHGWRVVNQRVLKNAPCSVAVLVDRGFGAGVAQTPGPGPMICVGQRICVLFFGGPDDREALELGGRMAEHPAVKVTVVRFRPSSADGMEGSNVILRPTHSKSSDNHYSFITTPINREKEKEQDETALAEFKSKWEATVEYKEKEVSSTNMIVEGVVALGKEMSYDLIVVGKGRVPSSLVMKLADRPAEHAELGPVGDILASSGKGIVSSILIIQQHGGGGHVEETPVLKIAQSNKNENELPMSNDGTSIDHV 853
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 30749067 30754533 - MELO3C003113.2.1 Cme08g02387 336650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g02387 853 MobiDBLite consensus disorder prediction 834 853 - -
Cme08g02387 853 Gene3D - 26 434 IPR038770 -
Cme08g02387 853 PANTHER CATION/H + ANTIPORTER 2 832 - -
Cme08g02387 853 PANTHER BNAC06G14930D PROTEIN 2 832 - -
Cme08g02387 853 Gene3D - 460 795 - -
Cme08g02387 853 Pfam Sodium/hydrogen exchanger family 33 426 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g02387 Cme-Chr8:30749067 Cme11g00056 Cme-Chr11:476797 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g02387 - - cmo:103490056 1588.55