Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g02394 ATGGCCGGCAAGGGAGAAGGTCCGGCTATCGGTATTGATCTCGGAACCACTTACTCTTGTGTTGGTGTTTGGCAGCACGATCGTGTTGAGATCATTGCCAATGACCAGGGTAACAGGACTACTCCTTCCTATGTTGCCTTCACCGATACTGAGCGTTTGATTGGTGATGCTGCTAAGAACCAGGTCGCCATGAACCCGATTAACACCGTCTTTGACGCGAAGAGGTTGATCGGTAGAAGATTCAGCGACTCTTCAGTCCAAAGTGACATCAAGTTGTGGCCATTCAAGGTCATCCCTGGACCAGGTGACAAGCCCATGATCGTTGTTAACTACAAGGGTGAAGAGAAGCAGTTCGCTGCTGAAGAAATCTCTTCCATGGTTCTTATTAAGATGCGTGAAATTGCCGAAGCTTACCTCGGTTCCACAGTGAAGAACGCCGTTGTCACTGTTCCTGCTTACTTCAACGACTCCCAACGTCAAGCCACCAAGGATGCTGGTGTCATTGCTGGTCTCAACGTCATGAGAATTATCAATGAACCCACCGCTGCCGCCATTGCCTACGGTCTTGACAAGAAGGCAACAAGTGTCGGTGAAAAGAATGTCTTGATCTTCGATCTTGGTGGTGGTACTTTTGATGTCTCTCTTCTCACCATTGAAGAGGGTATCTTCGAGGTGAAGGCCACTGCTGGAGACACTCATCTTGGTGGTGAAGATTTTGACAACAGACTTGTCAACCACTTTGTTCAAGAATTCAAGAGGAAGCACAAGAAGGACATCAGTGGCAACCCCAGAGCTCTTAGAAGGCTGAGAACTTCTTGTGAGAGAGCCAAGAGAACTCTCTCATCCACTGCTCAGACCACCATTGAGATTGATTCTTTGTATGAAGGAATTGACTTTTACTCCACCATTACTCGTGCTAGATTCGAGGAATTGAACATGGATCTTTTCAGAAAGTGTATGGAACCCGTCGAGAAGTGTTTGAGAGATGCTAAGATGGACAAGAGCACTGTTCATGATGTTGTACTTGTTGGTGGTTCGACTAGAATTCCCAAGGTCCAACAGTTGTTGCAAGACTTCTTCAATGGCAAGGAACTTTGCAAGAGCATTAACCCCGATGAAGCCGTTGCCTACGGTGCTGCTGTACAAGCTGCCATCTTGAGCGGTGAAGGCAATGAGAAGGTGCAGGATCTTCTTCTATTGGATGTCACCCCTCTTTCACTTGGTTTGGAAACCGCCGGTGGAGTCATGACTGTTTTGATCCCAAGAAACACCACAATTCCCACGAAGAAGGAACAAGTCTTCTCTACCTACTCCGACAATCAGCCCGGTGTGTTGATCCAAGTATACGAAGGTGAAAGGACAAGAACACGCGACAACAACTTGCTTGGAAAATTCGAACTTTCCGGTATCCCTCCAGCTCCCAGGGGTGTTCCACAAATCACAGTGTGCTTTGATATCGACGCCAACGGTATCTTGAACGTCTCTGCCGAAGACAAGACCACCGGTCAAAAGAACAAAATCACCATTACTAACGACAAGGGAAGACTCTCCAAGGAGGAGATTGAGAAGATGGTTCAAGAGGCAGAGAAGTACAAGTCTGAAGATGAGGAGCACAAGAAGAAGGTTGAAGCAAAGAATGCCTTGGAGAACTACGCTTACAACATGAGGAACACAGTGAACGACGAGAAGATTGGTGCTAAGCTTTCCCCGGCCGACAAGAAGAAGATCGACGATGCCATCGAGCAGTCCATACAATGGCTGGACGCCAACCAGCTCGCTGAGGCCGACGAATTCGAGGACAAGATGAAGGAGTTGGAGAGCATTTGCAACCCAATCATCGCCAAGATGTACCAAGGTGCAGGAGCTGATATGGGCGGCGGTGCAGACGACAGTGCTCCTTCCGGCGGTAGCGGTGCTGGACCCAAGATTGAGGAAGTCGACTAA 1944 48.35 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDSSVQSDIKLWPFKVIPGPGDKPMIVVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVNDEKIGAKLSPADKKKIDDAIEQSIQWLDANQLAEADEFEDKMKELESICNPIIAKMYQGAGADMGGGADDSAPSGGSGAGPKIEEVD 647
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 30800204 30803393 + MELO3C003119.2.1 Cme08g02394 336657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g02394 647 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Cme08g02394 647 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Cme08g02394 647 MobiDBLite consensus disorder prediction 619 647 - -
Cme08g02394 647 Gene3D - 71 126 - -
Cme08g02394 647 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Cme08g02394 647 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524|GO:0140662
Cme08g02394 647 Gene3D - 545 619 IPR029048 -
Cme08g02394 647 PANTHER HEAT SHOCK PROTEIN 70KDA 1 628 IPR013126 GO:0005524|GO:0140662
Cme08g02394 647 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Cme08g02394 647 Gene3D - 10 384 - -
Cme08g02394 647 Coils Coil 521 541 - -
Cme08g02394 647 PRINTS 70kDa heat shock protein signature 8 21 - -
Cme08g02394 647 PRINTS 70kDa heat shock protein signature 36 48 - -
Cme08g02394 647 PRINTS 70kDa heat shock protein signature 58 66 - -
Cme08g02394 647 PRINTS 70kDa heat shock protein signature 146 166 - -
Cme08g02394 647 PRINTS 70kDa heat shock protein signature 209 219 - -
Cme08g02394 647 PRINTS 70kDa heat shock protein signature 337 353 - -
Cme08g02394 647 PRINTS 70kDa heat shock protein signature 369 389 - -
Cme08g02394 647 PRINTS 70kDa heat shock protein signature 396 415 - -
Cme08g02394 647 PRINTS 70kDa heat shock protein signature 477 493 - -
Cme08g02394 647 Gene3D - 192 366 - -
Cme08g02394 647 SUPERFAMILY Actin-like ATPase domain 198 388 IPR043129 -
Cme08g02394 647 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Cme08g02394 647 Gene3D Actin; Chain A, domain 4 235 318 - -
Cme08g02394 647 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Cme08g02394 647 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 544 IPR029047 -
Cme08g02394 647 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 622 IPR029048 -
Cme08g02394 647 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 628 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00751 Cme-Chr1:7562742 Cme08g02394 Cme-Chr8:30800204 1.04E-43 dispersed
Cme01g01852 Cme-Chr1:26292307 Cme08g02394 Cme-Chr8:30800204 2.13E-41 dispersed
Cme08g02394 Cme-Chr8:30800204 Cme09g00508 Cme-Chr9:4915047 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g02394 K03283 - csv:101215599 1223.38