Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g02463 ATGGGGGAAAGACTTGAGGTGTTTGGATTTTGGCCAAGTCCGTTTAGTTTGAGAGTGGAATTGGCTCTCAAACTCAAAGGCATCCAATACCAATACATTGAGGAAGATGTATTAAACAAAAAGAGCGATTTGTTGGTGAAATACAACCCAATTTACAAGAAGGTTCCTGTTCTTGTTCACCATGGAAAACCCATTTCAGAGTCTCTTGTAATTCTTGAATACATTGAAGAAACATGGAAACACGATCCCATCTTTCCCCAAGATTGCCATGCAAAAGCTCTTGCTAGGTTTTGGGCTGCCTATATCGATGGAAAGGTAGTGTCTACTTTAGGAAAAATTCGCGGAAGCAAAGGAGAAGAGATGGAGAAAGCTGTAGAAGAAGTAAAGGAGGCATTGGAACCACTTGAGAAAGAGCTTAAAAGCAACAAATTTTTTGGGGGAGAAAAAATTGGGTTTTTGGACATTGTAGGCATTCTCATAGCCTTTTGGATTCCTGCCAGTGAAGAAGCTTTAGGGATTGAACTGTTAACATCCCACAAATTTCCAAACCTAATACACTGGATTGAAGAACTTGCCAACAACAATGTGGTGAAGGAGCTTATCCCTAAAAAGGATGACCTTGTTGCCCATTTTAAAACTATTTTAGGGAAAAACTAG 657 39.57 MGERLEVFGFWPSPFSLRVELALKLKGIQYQYIEEDVLNKKSDLLVKYNPIYKKVPVLVHHGKPISESLVILEYIEETWKHDPIFPQDCHAKALARFWAAYIDGKVVSTLGKIRGSKGEEMEKAVEEVKEALEPLEKELKSNKFFGGEKIGFLDIVGILIAFWIPASEEALGIELLTSHKFPNLIHWIEELANNNVVKELIPKKDDLVAHFKTILGKN 218
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 31564654 31568241 + MELO3C033197.2.1 Cme08g02463 336726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g02463 218 Pfam Glutathione S-transferase, C-terminal domain 105 193 IPR004046 -
Cme08g02463 218 Coils Coil 118 138 - -
Cme08g02463 218 SUPERFAMILY GST C-terminal domain-like 77 215 IPR036282 -
Cme08g02463 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
Cme08g02463 218 PANTHER GLUTATHIONE S-TRANSFERASE U8 1 214 - -
Cme08g02463 218 SFLD Main (cytGST) 3 214 - -
Cme08g02463 218 SFLD Main.3: Omega- and Tau-like 3 214 IPR045073 -
Cme08g02463 218 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 214 IPR045073 -
Cme08g02463 218 Gene3D Glutaredoxin 1 87 - -
Cme08g02463 218 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Cme08g02463 218 CDD GST_N_Tau 5 79 - -
Cme08g02463 218 Gene3D - 88 217 - -
Cme08g02463 218 CDD GST_C_Tau 90 214 IPR045074 GO:0004364|GO:0006749
Cme08g02463 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 211 IPR010987 -
Cme08g02463 218 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g02463 Cme-Chr8:31564654 Cme08g02466 Cme-Chr8:31602743 2.27E-95 dispersed
Cme08g02463 Cme-Chr8:31564654 Cme08g02465 Cme-Chr8:31585426 6.81E-84 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g02463 K00799 - csv:105434443 382.104