Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g02465 ATGGCCGGAGAAGAGAAAGTGCAAGTGTTTGGTTTCCGGTCAGGTTCGTATAGTCGGAGAGTGGAGTTAGCTCTCAAACTAAAAGGCGTGGATTATGAACACATTGACGAAGATATGCTTAACAACAACAAGAGCGATTTGTTGGTGAAATACAACCCAATTTACAAGAAAGTGCCTGTTCTTGTCCACAATGGAAAACCCATTTCAGAGTCTCGTGTAATCCTTGAATACATTGAAGAAACTTGGATGGAAAGTTATGCCATCTTGCCTAAAGATCCCTATCAAAGAGCTCTTGCCAGATTCTGGGCTAAGTATATTGATGACAAGGTTGTGCCTGCGATAGAGAAGGCTTTTAGAAGCAATGAAGAAGAAAGAGAGAAGAGAATAGAAGAAGCTCATGAGATGCTAGAACCACTTGAGAAAGAGCTTCAGAACAAGTTATTCTTTGGAGGAGACAAAATTGGATTTGTTGACATTGTAGGTCTGGTTTTACCAGGCTGGATGCATGCCAGTGAAGAAGCTGCAGGCTTTGAGCTTCTAACAACTCACAAATTTCCAAACCTAAACAAATGGATTCAAGACTATATGAACCACAGCGTTGCAAAGGAAGTTCTACCTCAGAAGGATTTTCTTGTTGCATTTTTAAACAAAGTTGTGTTTGGTCGAAACAACTAG 675 40.44 MAGEEKVQVFGFRSGSYSRRVELALKLKGVDYEHIDEDMLNNNKSDLLVKYNPIYKKVPVLVHNGKPISESRVILEYIEETWMESYAILPKDPYQRALARFWAKYIDDKVVPAIEKAFRSNEEEREKRIEEAHEMLEPLEKELQNKLFFGGDKIGFVDIVGLVLPGWMHASEEAAGFELLTTHKFPNLNKWIQDYMNHSVAKEVLPQKDFLVAFLNKVVFGRNN 224
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 31585426 31588636 + MELO3C033196.2.1 Cme08g02465 336728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g02465 224 SFLD Main.3: Omega- and Tau-like 4 217 IPR045073 -
Cme08g02465 224 CDD GST_N_Tau 7 82 - -
Cme08g02465 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 92 220 IPR010987 -
Cme08g02465 224 Gene3D Glutaredoxin 1 91 - -
Cme08g02465 224 SFLD Glutathione Transferase (cytosolic) 4 217 IPR040079 -
Cme08g02465 224 SUPERFAMILY GST C-terminal domain-like 81 217 IPR036282 -
Cme08g02465 224 PANTHER GLUTATHIONE S-TRANSFERASE U8 6 216 - -
Cme08g02465 224 CDD GST_C_Tau 93 217 IPR045074 GO:0004364|GO:0006749
Cme08g02465 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 216 IPR045073 -
Cme08g02465 224 Gene3D - 92 220 - -
Cme08g02465 224 SUPERFAMILY Thioredoxin-like 6 111 IPR036249 -
Cme08g02465 224 ProSiteProfiles Glutaredoxin domain profile. 1 96 - -
Cme08g02465 224 Pfam Glutathione S-transferase, C-terminal domain 101 197 IPR004046 -
Cme08g02465 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 86 IPR004045 -
Cme08g02465 224 Pfam Glutathione S-transferase, N-terminal domain 6 79 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g02465 Cme-Chr8:31585426 Cme08g02469 Cme-Chr8:31625406 1.37E-85 dispersed
Cme09g01016 Cme-Chr9:14277346 Cme08g02465 Cme-Chr8:31585426 3.85E-51 dispersed
Cme08g02463 Cme-Chr8:31564654 Cme08g02465 Cme-Chr8:31585426 6.81E-84 proximal
Cme08g02465 Cme-Chr8:31585426 Cme08g02466 Cme-Chr8:31602743 4.14E-123 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g02465 K00799 - csv:101220464 416.772