Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g02466 ATGGCCGGAGAAAATCAGGAAGTGCAAGTTTTTGGTTTCCGATTAGGTCCGTATAGTCTGAGAGTGGAATTGGCTCTCAAACTCAAAGGCGTCGTTTACAAACATATTGACGAAGATTTGCTCAACAAAAAGAGCGATTTGTTGGTGAAATACAACCCAGTTTACAAGAAGGTTCCTGTTCTTGTTCATCATGGAAAACCCATTTCAGAGTCTCTTGTAATTCTTGAATACATCGAAGAAACTTGGACGCAAAATTATACCATCTTGCCTAAAGATCCCTATCAAAGAGCTCTCGCCAGATTCTGGGCTAAGTATATTGATGAGAAGGTTGTACCTGCAGTACAAAAAGTTGCAAGAAGCCAAGAAGACGAAAGAGAGAAGAGCATAGAAGACGCACAGGCGGCACTTGAACCACTTGAGGAAGAACTTAAAAACAAGTTGTTCTTTGGAGGAGACACAATTGGATTTGTTGACATTGCAGGCCTAGTTTTAGCTCGTTGGATTCCTGCCACCGAAGAAGCCGTAGGCTTTGAGCTTTTATCAGCCCACAAGTTTCCAAATCTAACTAAATGGAGTCAAGATTTTGTGAACCACAGTGTTGCAAAGGAAGTTTTGCCTGAAAAAGATGTTCTAGTTGCCTTCTTGAAGAATGTTGTGTTTAGTACAAAAAACTAG 675 40.74 MAGENQEVQVFGFRLGPYSLRVELALKLKGVVYKHIDEDLLNKKSDLLVKYNPVYKKVPVLVHHGKPISESLVILEYIEETWTQNYTILPKDPYQRALARFWAKYIDEKVVPAVQKVARSQEDEREKSIEDAQAALEPLEEELKNKLFFGGDTIGFVDIAGLVLARWIPATEEAVGFELLSAHKFPNLTKWSQDFVNHSVAKEVLPEKDVLVAFLKNVVFSTKN 224
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 31602743 31604552 + MELO3C003192.2.1 Cme08g02466 336729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g02466 224 Gene3D - 89 223 - -
Cme08g02466 224 SUPERFAMILY Thioredoxin-like 7 111 IPR036249 -
Cme08g02466 224 SUPERFAMILY GST C-terminal domain-like 80 217 IPR036282 -
Cme08g02466 224 Pfam Glutathione S-transferase, N-terminal domain 8 79 IPR004045 -
Cme08g02466 224 CDD GST_N_Tau 8 82 - -
Cme08g02466 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 220 IPR045073 -
Cme08g02466 224 CDD GST_C_Tau 93 216 IPR045074 GO:0004364|GO:0006749
Cme08g02466 224 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 1 220 - -
Cme08g02466 224 Pfam Glutathione S-transferase, C-terminal domain 101 197 IPR004046 -
Cme08g02466 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 92 220 IPR010987 -
Cme08g02466 224 SFLD Glutathione Transferase (cytosolic) 5 217 IPR040079 -
Cme08g02466 224 SFLD Main.3: Omega- and Tau-like 5 217 IPR045073 -
Cme08g02466 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 86 IPR004045 -
Cme08g02466 224 Gene3D Glutaredoxin 1 88 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g02463 Cme-Chr8:31564654 Cme08g02466 Cme-Chr8:31602743 2.27E-95 dispersed
Cme08g02466 Cme-Chr8:31602743 Cme08g02469 Cme-Chr8:31625406 1.14E-88 dispersed
Cme08g02465 Cme-Chr8:31585426 Cme08g02466 Cme-Chr8:31602743 4.14E-123 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g02466 K00799 - csv:101215228 390.963