Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g02497 ATGATTGTTTCCATGGACTTAAATGCCTCGCCGGTGCCTGAAGACGATGAAGAGGCGTTTGAGAGGCATGAAGAGGTGTACATAGCTCCTGAGGAACATATAGTGACTGGTGTCAGTATAGCACGGCGGGAGCGAGAAGAAAGAAAAAGGCGGTTGAAGAGAGATCGCTCTCTCGAGAGACCGGTACATGAATACCAACAACCTGCACGGGATCAGTTTTACCCTTCTAAAAACCAAAAATCTGATAGAAACAGGCTTCCTCCAGGTTGGCTGGATTGCCCTGCATTTGGTCAAGAAATATGTTGGATGATTCCTTCCAAGGTTCCTTTGGGGGAATCCTTCAATGATTGTATAGCACCTGGTAAAAGATACTCATTTAAGCAAGTGATCCATCAGCAGAGAGTTTGGGGAAGAAAACTCGGTTTGGTGATTGATTTGACAAATTCTTATCGTTATTATACAACATCAGATTTGAATAAAGAGGGTATCAAGTATGTTAAGATTCCTTGCAAGGGGAGGGATTCTGTACCTGACAACAAGTCAGTCAATACATTCGTTTACGAGGTCATTCAGTTCATTTCTCGTCAGAAACAACAATCGAAGAAATATATTCTTGTCCACTGTACACATGGCCATAATCGCACTGGATATATGATCATAAATTATCTTGTGCGTGCACTATCCATTTCTGTTACCCAGGCTCTTAAAATGTTTTCTGATGCACGTCCTCCTGGAATTTACAAGCCAGACTACGTTGATGCGTTATATACCTTTTACCACGAAAGAAAACCTGATGCAGTTGTTTGCCCATCCACACCCGAGTGGAAGAGATCTTCGGATCTTGATCTCAATGGGGAAGCAGTTCCAGATGATGACGATGATGGAGGTCCTGCTGCTCTTTTGAATGAAAATCATGATGATGGTGCTCAAGTGATGACAAATGATGATGTTTTGGGTGATGAGATACCTGAAGACCAAGAACGTGGTTTGAAACAATTCTGCTATCAAATGCTTAAATTGAATCCTGGAGCAAGAGCAAATTTGCAATTTCCAGGGTCGCATCCAGTGTCTCTGAACAGAGACAATCTTCAACTGCTAAGGCAACGCTATTATTATGCCACATGGAAAGCTGATGGAACGAGATATATGATGCTAATTACCATGGATGGATGCTACTTGATCGACAGAGGTTTTAAATTTAGAAGAGTCCAAATGAGATTTCCGTACAGAAATGCAAATGATGGCCAAGTTGAGAAGATTCACCACTACACACTACTTGATGGAGAAATGATAATTGATACTATGCCAGACTCGCAGAAGCAAGAGAGAAGATATCTTATATATGATATGATGGCGATTAATTATGTTTCGGTCATTGAGCGTCCTTTCTACGAACGGTGGAAGATGCTTGAAAAAGAAGTGATTGAACCTCGCAATTTTGAGCGCCAGAATATTTATCAAAGCAGAAACCCGCATTATAGATATGACCTAGAGCCATTCAGGGTGAGGAGAAAAGATTTTTGGTTGCTCTCTACAGTTACCAAACTTTTGAAGGAGTTCATACCGAGGCTTTCTCATGATGCTGATGGTCTAATATTTCAGGGTTGGGATGATGCTTATGTTCCTCGAACACATGAGGGTCTTTTAAAGTGGAAATATCCGGAAATGAACTCAGTCGACTTCTTATTTGAGGTTTTGGGTGAAGATGATTCTCAGGTTCTTATTTTGTTTGAACGAGGAAAGAGGAAGACCATGGAAGGAAATCGGGTTAAGTTCAAAGATGGCGATCCCTCCTTTTATTCAGGAAAGATTGTGGAGTGCTCTTGGGATTCTGATGAGCAAGTATGGGTCTGCATGCGAATTCGGACAGACAAAACAACTCCAAATGATTTCAATACTTATAAAAAGGTAATGCGGAGCATTAGAGACAATATCACGGAGGAGGATTTGTTGAAAGAGATTCATGAGATCATACGCTTGCCCATGTATGCAGATAGGATAAGGAATGATAGTAAAGCGGCTCAACATACGAATTCAACACGACGGAGGTGA 2052 41.33 MIVSMDLNASPVPEDDEEAFERHEEVYIAPEEHIVTGVSIARREREERKRRLKRDRSLERPVHEYQQPARDQFYPSKNQKSDRNRLPPGWLDCPAFGQEICWMIPSKVPLGESFNDCIAPGKRYSFKQVIHQQRVWGRKLGLVIDLTNSYRYYTTSDLNKEGIKYVKIPCKGRDSVPDNKSVNTFVYEVIQFISRQKQQSKKYILVHCTHGHNRTGYMIINYLVRALSISVTQALKMFSDARPPGIYKPDYVDALYTFYHERKPDAVVCPSTPEWKRSSDLDLNGEAVPDDDDDGGPAALLNENHDDGAQVMTNDDVLGDEIPEDQERGLKQFCYQMLKLNPGARANLQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRGFKFRRVQMRFPYRNANDGQVEKIHHYTLLDGEMIIDTMPDSQKQERRYLIYDMMAINYVSVIERPFYERWKMLEKEVIEPRNFERQNIYQSRNPHYRYDLEPFRVRRKDFWLLSTVTKLLKEFIPRLSHDADGLIFQGWDDAYVPRTHEGLLKWKYPEMNSVDFLFEVLGEDDSQVLILFERGKRKTMEGNRVKFKDGDPSFYSGKIVECSWDSDEQVWVCMRIRTDKTTPNDFNTYKKVMRSIRDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR 683
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 31882188 31894093 + MELO3C003222.2.1 Cme08g02497 336760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g02497 683 MobiDBLite consensus disorder prediction 43 66 - -
Cme08g02497 683 PIRSF mRNA_capping_HCE 74 683 IPR017074 GO:0004484|GO:0006370|GO:0140818
Cme08g02497 683 PANTHER MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED 3 683 - -
Cme08g02497 683 ProSiteProfiles Dual specificity protein phosphatase domain profile. 108 265 IPR020422 GO:0006470|GO:0008138
Cme08g02497 683 CDD Adenylation_mRNA_capping 325 553 IPR001339 GO:0004484|GO:0005524|GO:0006370
Cme08g02497 683 Gene3D DNA ligase/mRNA capping enzyme 313 550 - -
Cme08g02497 683 CDD RNA_5'-triphosphatase 89 256 - -
Cme08g02497 683 ProSitePatterns Tyrosine specific protein phosphatases active site. 206 216 IPR016130 GO:0016311|GO:0016791
Cme08g02497 683 MobiDBLite consensus disorder prediction 43 85 - -
Cme08g02497 683 ProSiteProfiles ATP-dependent DNA ligase family profile. 436 582 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Cme08g02497 683 MobiDBLite consensus disorder prediction 1 20 - -
Cme08g02497 683 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 86 277 IPR029021 -
Cme08g02497 683 PANTHER MRNA-CAPPING ENZYME 3 683 - -
Cme08g02497 683 Pfam mRNA capping enzyme, catalytic domain 354 552 IPR001339 GO:0004484|GO:0005524|GO:0006370
Cme08g02497 683 SUPERFAMILY Nucleic acid-binding proteins 555 668 IPR012340 -
Cme08g02497 683 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 183 253 IPR000387 GO:0016311|GO:0016791
Cme08g02497 683 MobiDBLite consensus disorder prediction 278 306 - -
Cme08g02497 683 SMART dsp_5 18 261 IPR020422 GO:0006470|GO:0008138
Cme08g02497 683 Pfam mRNA capping enzyme, C-terminal domain 557 651 IPR013846 -
Cme08g02497 683 Gene3D Protein tyrosine phosphatase superfamily 82 295 IPR029021 -
Cme08g02497 683 Pfam Dual specificity phosphatase, catalytic domain 138 259 IPR000340 GO:0008138|GO:0016311
Cme08g02497 683 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 314 553 - -
Cme08g02497 683 Gene3D - 551 660 IPR012340 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g02497 K13917 - csv:101209960 1360.51