Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g02519 ATGGCCACCGCCGCCGCAACCTCCTCCTTCATCGGAACACGCCTCGCCGAAATAGTGCCGAGTTCTGGCAGAGTCCAAGCCCGGTTCGGATTTGGAAAGAAAAAGAGTCCGCCGAAGAAATCGCCGTCGTCTAAGGGAATTTCCGACCGGCCGCTGTGGTTTCCAGGAGCCAAGGCGCCGGAATGGCTGGACGGAAGCTTGGTAGGGGACTATGGATTTGATCCGTTTGGGTTGGGGAAACCGGCTGAGTATTTGCAGTATGATTTGGACTCGTTGGATCAAAATTTGGCGAAGAATGTGGCTGGAGATATAATTGGGACGAGATTTGAGAGCGCGGAAGTGAAATCGACGCCGTTTCAGCCATACACGGAGGTATTTGGATTGCAGAGATTCCGTGAATGTGAGCTTATTCATGGACGGTGGGCAATGCTGGCTACACTCGGTGCTCTCTCTGTTGAATGGCTCACCGGGGTTACTTGGCAAGACGCCGGAAAAGTAGAATTAGTGGAAGGTTCATCCTACCTAGGCCAACCACTTCCCTTCTCCCTCACTACACTAATCTGGATCGAAGTTCTAGTGATCGGTTACATTGAGTTCCAAAGAAACGCGGAGCTGGACCCAGAGAAAAGGTTGTACCCAGGAGGCAAGTTTTTCGACCCTTTGGGTTTGGCTGAGGACCCAGAAAAGAAAGCAGTGTTACAATTGGCTGAGATCAAGCATGCACGCCTAGCCATGGTTGCGTTCCTTGGGTTTGCGGTTCAAGCTGCTGTCACCGGCAAAGGTCCACTCAACAACTGGGCTACCCATCTCAGTGACCCTCTCCACACTACTATTATTGACAACTTCTCTTCTTAA 855 51.46 MATAAATSSFIGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 284
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 32104340 32106216 - MELO3C003238.2.1 Cme08g02519 336782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g02519 284 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.2, CHLOROPLASTIC 2 284 - -
Cme08g02519 284 MobiDBLite consensus disorder prediction 29 52 - -
Cme08g02519 284 Gene3D Chlorophyll a/b binding protein domain 53 284 - -
Cme08g02519 284 Pfam Chlorophyll A-B binding protein 59 255 IPR022796 -
Cme08g02519 284 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 284 IPR001344 GO:0009765|GO:0016020
Cme08g02519 284 SUPERFAMILY Chlorophyll a-b binding protein 46 282 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme05g01586 Cme-Chr5:25072486 Cme08g02519 Cme-Chr8:32104340 9.46E-33 dispersed
Cme08g02519 Cme-Chr8:32104340 Cme09g00132 Cme-Chr9:974790 8.32E-37 dispersed
Cme08g02519 Cme-Chr8:32104340 Cme08g00160 Cme-Chr8:1124451 5.32E-30 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g02519 K08915 - csv:101208740 547.354