Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme08g02562 | ATGATACCAACGATAATGTCAAAATGGATGAGTTTAGTGAGCATTGTGTTGTTGGTGGGAGTCAGTTTAAGGTTTAGAAGTGTAAATGGGTTAAGTATGGGATATTACTTGATGAGTTGTCCCTTTGTTGATCCTATTGTCAAGAATACTGTCAACAGAGCTCTTCAAAATGATCCTACTTTAGCTGCTTCTCTTATTCGAATGCATTTTCATGATTGTTTCGTTGAGGGATGCGATGGATCAATATTAATTGATTCGACAAGAGACAATACAGCAGAAAAGGACTCTCCTGCTAACCTTAGCTTACGAGGCTATGAGGTTATTGATGAGATTAAGGAGCAACTTGAACGCCAATGTCCCGGGGGTCCATTTTATGAGATACCGAAAGGAAGGAAGGACGGAACTAGATCAAGAATCGAAGACACTGTTAATTTACCTTCTCCTTTCTTAAATGCTTCTCAGCTTATCAACACTTTTGCTCAACGTGGCTTTACTCCTCAACAAATGGTTGCACTTTCCGGAGCACATACATTGGGAGTGGCAAGATGCATATCATTCAAAGGGAGACTTGACGGCAACGACCCTCTTCTAAGTCCAAACTTCGGAAGAGCATTGTCAAGAACATGCAGCAATGGCGATAATGCGCTACAAACATTCGATGCCACGCCCGATAGCTTCGACAATGTCTATTACAATGCACTGTCGAGAGGCGCTGGAGTTTTGTTTTCAGACCAGACATTGTTTGCTAGCCCTCGCACGAGAGACATTGTGACAGCCTACGCCATGAACCAAGCCCTGTTCTTCTTGGACTTTCAACGAGCCATCACAAAAATGGGGTTACTTGATGTGAAGGAAGGTTATAGAGGCCAAGTTCGTCGCAACTGCCGTAGAGTTAATTAA | 900 | 42.78 | MIPTIMSKWMSLVSIVLLVGVSLRFRSVNGLSMGYYLMSCPFVDPIVKNTVNRALQNDPTLAASLIRMHFHDCFVEGCDGSILIDSTRDNTAEKDSPANLSLRGYEVIDEIKEQLERQCPGGPFYEIPKGRKDGTRSRIEDTVNLPSPFLNASQLINTFAQRGFTPQQMVALSGAHTLGVARCISFKGRLDGNDPLLSPNFGRALSRTCSNGDNALQTFDATPDSFDNVYYNALSRGAGVLFSDQTLFASPRTRDIVTAYAMNQALFFLDFQRAITKMGLLDVKEGYRGQVRRNCRRVN | 299 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 32919372 | 32922484 | + | MELO3C003275.2.1 | Cme08g02562 | 336825 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme08g02562 | 299 | CDD | secretory_peroxidase | 30 | 298 | IPR033905 | GO:0004601|GO:0042744 | |
Cme08g02562 | 299 | ProSitePatterns | Peroxidases active site signature. | 62 | 73 | IPR019794 | GO:0004601 | |
Cme08g02562 | 299 | PANTHER | PEROXIDASE 25-RELATED | 19 | 297 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme08g02562 | 299 | Gene3D | Peroxidase, domain 2 | 146 | 278 | - | - | |
Cme08g02562 | 299 | ProSiteProfiles | Plant heme peroxidase family profile. | 30 | 299 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme08g02562 | 299 | Gene3D | - | 31 | 122 | - | - | |
Cme08g02562 | 299 | PRINTS | Haem peroxidase superfamily signature | 219 | 234 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme08g02562 | 299 | PRINTS | Haem peroxidase superfamily signature | 121 | 133 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme08g02562 | 299 | PRINTS | Haem peroxidase superfamily signature | 62 | 76 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme08g02562 | 299 | PRINTS | Haem peroxidase superfamily signature | 168 | 183 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme08g02562 | 299 | SUPERFAMILY | Heme-dependent peroxidases | 30 | 299 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cme08g02562 | 299 | Pfam | Peroxidase | 47 | 262 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme08g02562 | 299 | PANTHER | PEROXIDASE 47 | 19 | 297 | - | - | |
Cme08g02562 | 299 | PRINTS | Plant peroxidase signature | 273 | 286 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme08g02562 | 299 | PRINTS | Plant peroxidase signature | 40 | 59 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme08g02562 | 299 | PRINTS | Plant peroxidase signature | 233 | 250 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme08g02562 | 299 | PRINTS | Plant peroxidase signature | 103 | 116 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme08g02562 | 299 | PRINTS | Plant peroxidase signature | 64 | 84 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme08g02562 | 299 | PRINTS | Plant peroxidase signature | 217 | 232 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme08g02562 | Cme-Chr8:32919372 | Cme06g00951 | Cme-Chr6:6760364 | 3.44E-81 | dispersed | |
Cme08g02562 | Cme-Chr8:32919372 | Cme12g01717 | Cme-Chr12:23962345 | 6.99E-68 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme08g02562 | K00430 | - | csv:101202852 | 564.303 |