Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g00045 ATGGGCTGTATTTGCTCAAGAGATTCCTCAGAACCAGAGGATAGCAGTCACAAAGAGCCTGAAAAAGAATTCAACAAATCATCAGTCCAGTTGGTTGCCCCTTCTCCCTCAAAAAGAGAGGATATGTTGTTAGAGATTCAGTTGTCAAGGCAGGCATCTAAAGCAAATGGGGGCTCTGTTCATAAAGCAAAGGCCAACGGAGGTTCTGTCCATCGAGCAAAAGAGGATGATGAATCTGAGAATAAATCTTTAAAGGCTGCAAAAGCAAATAATGATAATGCTTCGGTAGGTGGAAAGCAGCTTGACATTTTTAGGTTAGCTAGCTTGTCTAAAGGGGCTGAAACTGAACTTGTCATGGCTGGATGGCCTTCATGGTTAGCTTCTGTTGCAGGAGAAGCCATCAAAGGGTGGGTGCCTCGGCGGGCTGACTCCTTTGAAAAGTTGGATAAAATTGGACAGGGAACTTACAGCAGTGTATATAAAGCCCGTGACCTTGAAACTGGTAAAATTGTGGCACTGAAAAAAGTAAGATTTGTAAATATGGATCCCGAAAGTGTCCGTTTTATGGCTAGGGAAATCTATATTTTGCGCAAACTTGATCATCCGAATGTTATGAAGCTTGAGAGTCTAGTCACTTCCAGAATGTCGGGCAGCTTGTACCTTGTTTTTGAGTACATGGAGCATGACCTTGCTGGTCTTTCAGCAGCTCCTGGACATAAGTTTACGGAGGCTCAGATTAAATGTTATGTGCAACAATTGCTGCATGGACTCGAACACTGTCATAGTCGGGGAATTCTACATCGGGATATCAAAGGTTCAAATCTTCTACTTGACAATAATGGTGTGCTCAAGATTGGAGACTTTGGTCTTGCTACCTTTTTTCAGCCTGATCAAAAGCAGCCGTTAACGAGTCGGGTTGTGACGTTGTGGTACAGAGCACCCGAGCTTTTGCTTGGTGCTACCCAATATGGACCTGGCATAGATCTCTGGAGCTGTGGTTGTATCGTTGCTGAACTATTTGCTGGAAAACCTATTATGCCAGGAAGAACAGAGGTGGAACAAATGCACAAGATTTTTAAGCTCTGTGGTTCACCATCTGAGGAGTTCTGGCGGAGAACTAAGTTGCCACATGCAACCAGCTTCAAACCTCAATCCCGTTATAAAAGCTGCCTTTCTGAGACATTTAAAAGTTTCCCTCCTTCAGCTCTGGCTCTTGTGAATAAACTACTTGCTATTGAACCAGAGCACAGAGGATCGGCTACTTTAGCCCTCAGAAGTGAGTTTTTCAGAACAGAACCTCTTCCTTGTGACCCATCAAGCTTACCAAAATATCCTCCGAGCAAAGAATTCGATGCCAAGCTGCGGAATGAAGAAGAAAGAAAGAAAAAAGCAGAAGCTGTGAAGGGACGTCATCCTGAATCAGTAAGAAGGGGCTCAAGAGACACAAAAGCAGTTCCTACTCCCGAATTCAATACTCAAGGAGATATTACTATAAAGGTACACCCAATCTCGAAAAAAACAAGTGCGAAATACAACCCTCAAGAGGACGGTGAGCCTTCGAGAGTTGTGCAGAATCGGTACAACCATTCGACATCTATGGTGCACCCAAGCATTGCAGGTTCATGGGGTAAGCCTACTGGAGCCTCGAGAAATCATGCAGAGTTGAAGGCACAGAAATCTCAGATGCATCGGTCAGTGGGAGATTTATCAGCCTCTTCTCTCAAGAAGGAAGATTTAGTGTCTAATAAAGATCCCGGAATGGGTTATGTTCAGAAGAAGAACAGAATACACTACTCAGGACCATTGGTGCCTACAGGGGGAACCATTGAAGACATGCTGAAGGAGCACGAGAGACAAATACAGCAGGCTTTTCGAAAGGCACGACTCGACAAAGCAAAGACGACCAAGAGTTACTGTGATCAGCTTTGA 1929 44.32 MGCICSRDSSEPEDSSHKEPEKEFNKSSVQLVAPSPSKREDMLLEIQLSRQASKANGGSVHKAKANGGSVHRAKEDDESENKSLKAAKANNDNASVGGKQLDIFRLASLSKGAETELVMAGWPSWLASVAGEAIKGWVPRRADSFEKLDKIGQGTYSSVYKARDLETGKIVALKKVRFVNMDPESVRFMAREIYILRKLDHPNVMKLESLVTSRMSGSLYLVFEYMEHDLAGLSAAPGHKFTEAQIKCYVQQLLHGLEHCHSRGILHRDIKGSNLLLDNNGVLKIGDFGLATFFQPDQKQPLTSRVVTLWYRAPELLLGATQYGPGIDLWSCGCIVAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEEFWRRTKLPHATSFKPQSRYKSCLSETFKSFPPSALALVNKLLAIEPEHRGSATLALRSEFFRTEPLPCDPSSLPKYPPSKEFDAKLRNEEERKKKAEAVKGRHPESVRRGSRDTKAVPTPEFNTQGDITIKVHPISKKTSAKYNPQEDGEPSRVVQNRYNHSTSMVHPSIAGSWGKPTGASRNHAELKAQKSQMHRSVGDLSASSLKKEDLVSNKDPGMGYVQKKNRIHYSGPLVPTGGTIEDMLKEHERQIQQAFRKARLDKAKTTKSYCDQL 642
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 330932 335905 - MELO3C022196.2.1 Cme09g00045 336905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g00045 642 Coils Coil 447 467 - -
Cme09g00045 642 Gene3D Phosphorylase Kinase; domain 1 132 227 - -
Cme09g00045 642 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 78 630 - -
Cme09g00045 642 SUPERFAMILY Protein kinase-like (PK-like) 138 437 IPR011009 -
Cme09g00045 642 Gene3D Transferase(Phosphotransferase) domain 1 228 469 - -
Cme09g00045 642 Pfam Protein kinase domain 145 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme09g00045 642 PANTHER CELL DIVISION PROTEIN KINASE 78 630 - -
Cme09g00045 642 MobiDBLite consensus disorder prediction 68 85 - -
Cme09g00045 642 MobiDBLite consensus disorder prediction 458 490 - -
Cme09g00045 642 MobiDBLite consensus disorder prediction 10 25 - -
Cme09g00045 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Cme09g00045 642 SMART serkin_6 145 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme09g00045 642 MobiDBLite consensus disorder prediction 1 36 - -
Cme09g00045 642 MobiDBLite consensus disorder prediction 458 483 - -
Cme09g00045 642 ProSiteProfiles Protein kinase domain profile. 145 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme09g00045 642 Coils Coil 613 633 - -
Cme09g00045 642 ProSitePatterns Protein kinases ATP-binding region signature. 151 174 IPR017441 GO:0005524
Cme09g00045 642 CDD STKc_CDK9_like 145 429 - -
Cme09g00045 642 MobiDBLite consensus disorder prediction 49 92 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme09g00045 Cme-Chr9:330932 Cme10g01289 Cme-Chr10:13887860 4.72E-16 dispersed
Cme09g00045 Cme-Chr9:330932 Cme05g01749 Cme-Chr5:26533664 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65133 PF00069 Pkinase 6.20E-70 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g00045 K08819 - csv:101208709 1243.02