Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme09g00110 | ATGACCGATTATGATGATGTTAGATATTGTTGTTCTGGAGCTGATGTTTGCTTAGATTGCTGGCCTCTAATGACAGCTGCCATAAAAGTGATCGATACTACCCTTCGAGATGACTTTGGTTTTAACCACATTCTATGGGTATTTAGTGGTCGCCGTGGTGTTCATTGTTGGGTCTGTGATGGGAAAGCTAGAAGGTTGTCTAATGAACAGCGAGCTGCCATTGCTGAGTATTTCCATTTATATCAGGGTAATGAAAATAGTCGCAAGAAAATTTCTCTAACGGGTCCAGTTCTTCATCCATTCCTAGCGAGATCGTACACAGAAGTTCTCAAGGATAGCTTTGAATCACAATTGCTTTAG | 360 | 41.11 | MTDYDDVRYCCSGADVCLDCWPLMTAAIKVIDTTLRDDFGFNHILWVFSGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLARSYTEVLKDSFESQLL | 119 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 837753 | 840937 | - | MELO3C027184.2.1 | Cme09g00110 | 336970 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme09g00110 | 119 | Pfam | DNA primase small subunit | 1 | 117 | IPR002755 | GO:0003896|GO:0006269 | |
| Cme09g00110 | 119 | Gene3D | DNA primase, PRIM domain | 1 | 119 | - | - | |
| Cme09g00110 | 119 | PANTHER | DNA PRIMASE | 1 | 118 | - | - | |
| Cme09g00110 | 119 | PANTHER | DNA PRIMASE SMALL SUBUNIT | 1 | 118 | IPR014052 | GO:0003896|GO:0006269 | |
| Cme09g00110 | 119 | SUPERFAMILY | Prim-pol domain | 1 | 111 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme09g00109 | Cme-Chr9:837753 | Cme09g00110 | Cme-Chr9:837753 | 4.13E-49 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme09g00110 | K02684 | - | csv:101203146 | 251.136 |