Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g00132 ATGGCTTCTCTGGCAGCTTCCACCGCCGCCGCCTCCCTCGGCGTCTCCGAAATGCTAAGAAATCCTCTTAGCTTCTCCTCTAGGTCCGCTCCTCCCTCGGCCTCCAGCCCTGCCACCTTCAAAACCGTTGCGCTTTTCGGGAAGAAGCCCGCAGCACCGTCCAAGCCAAAGCCCGCCCCCGCGTCTCCCGTCAACGACGAGCTCGCCAAGTGGTATGGTCCGGACAGAAGGATTTTCTTGCCAGATGGTTTGTTGGACCGATCGGAGATCCCCGAGTACTTGAACGGAGAAGTCCCCGGCGACTATGGTTATGACCCCTTTGGACTCAGCAAGAAGCCAGAAGACTTCAGCAAATACCAAGCATTTGAATTGATTCATGCAAGATGGGCTATGCTTGGAGCTGCTGGTTTCATCATCCCTGAGGCCTTCAACAAATTCGGCGCCAACTGCGGCCCCGAGGCTGTCTGGTTCAAGACTGGAGCTCTACTTCTTGATGGAAACACATTGAATTACTTTGGAAACAACATTCCCATCAACCTCATCGTCGCCGTCATTGCCGAGGTTGTTCTTGTTGGTGGCGCTGAATATTACAGAATCATCAACGGCTTGAACTTTGAGGACAAGCTTCACCCGGGAGGGCCATTCGACCCATTGGGGTTAGCGGACGACCCAGACCAGGCAGCAATCTTGAAGGTGAAAGAGATCAAGAATGGAAGATTGGCAATGTTTGCAATGCTAGGGTTTTACTTCCAAGCATATGTGACAGGAGAAGGGCCAGTGGAGAATTTGGCAAAGCATTTGAGTGATCCTTTTGGAAACAATTTGCTCACAGTCATTTCAGGGAATGCTGAAAGAGTTCCAACTCTTTAA 870 51.61 MASLAASTAAASLGVSEMLRNPLSFSSRSAPPSASSPATFKTVALFGKKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL 289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 974790 977114 - MELO3C022113.2.1 Cme09g00132 336992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g00132 289 SUPERFAMILY Chlorophyll a-b binding protein 71 279 - -
Cme09g00132 289 Pfam Chlorophyll A-B binding protein 91 252 IPR022796 -
Cme09g00132 289 Gene3D Chlorophyll a/b binding protein domain 78 289 - -
Cme09g00132 289 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 289 IPR001344 GO:0009765|GO:0016020
Cme09g00132 289 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 289 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g00160 Cme-Chr8:1124451 Cme09g00132 Cme-Chr9:974790 7.86E-66 dispersed
Cme08g02519 Cme-Chr8:32104340 Cme09g00132 Cme-Chr9:974790 8.32E-37 dispersed
Cme09g00132 Cme-Chr9:974790 Cme12g01212 Cme-Chr12:20231593 1.09E-67 dispersed
Cme09g00132 Cme-Chr9:974790 Cme11g01575 Cme-Chr11:23355951 1.56E-66 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g00132 K08916 - csv:101218137 531.946