Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g00147 TTCTCTCCCTTTTCCAATTTCTTAACCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTTCTTTCCTTTTGTTCTTTTCTTTCTACCCAATATTAATGCCCATCATGTTGCCACTCCTTCTCACAACTCTAGCTCTCTTAACGACGTCGTTCTTCATCTTCTCTTTACTATACGACACCGTTTCTTGCTACTTGTTAACTCCTAGACGCATCAAGCAAAAGATGGCCAAGCAAGGTGTTCATGGCCCTAAACCCCGTCCTCTCCTCGGTAACATCCTCGACGTCGCCTCCCTCCTCTCCAAATCTACCTCCTCCGACATGCCCTCCATCTCTCACGACCTCGTCCCCCGTCTCCTCCCTCATTTCCTCGCCTGGTCCTCCCAATTCGGGAAGAGGTTTATATTTTGGAATGGGATTGAGCCAAGAATGTGTTTAACCGAAACCGATTTGATAAAAGAGCTTTTATCAAAATACAGCACGGTTTCCGGGAAATCATGGCTACAACAACAAGGCTCTAAGCATTTTATAGGACGAGGTCTTTTAATGGCGAACGGTCAAAATTGGTTCCATCAACGACATATCGTCGCGCCAGCTTTCGTCGGGGATCGACTTAAGAGTTACGCAGGGTATATGGTGGAGTGTACAAAGGAGATGCTTGAATCAATAGAAAAGGAGGTAAAGTCGGGGAGATCGGAATTTGAAATCGGCGAGTATATGACAAGACTTACGGCTGATATAATTTCGAGAACGGAGTTCGAGAGTAGTTTTGAAAAGGGAAAACAAATCTTTCATTTACTTACTGTTTTACAGCATCTTTGTGCTCAGGCCAGCCGCCACCTCTGTTTTCCCGGTAGCCGGTTTTTTCCAAGTAAATACAACAGAGAGATAAAGGCATTGAAAGGGAAAGTGGAGGAATTATTAATGGAAATAATACAAAGCAGAAAGGATTGTGTGGAAATTGGGAGAAGCAGTTCATATGGAAATGATTTATTAGGAATGTTATTAAATGAAATGCAAAAGAAAAAATTGGATGGAAATAATGGTTTGAGTTTGAATTTGCAAATTATAATGGATGAATGCAAAACCTTCTTCTTTGCTGGCCATGAAACCACTGCCCTTTTACTCACTTGGACTGTCATGTTATTAGCCACTAACCCTACTTGGCAAGACAAGGTTCGAGCCGAAGTTATGGCAGTATGTGGTTCGGAAACCCCCTCGTTTCATCATCTTTCCAAACTTTCTCTGTTGAGTATGGTGATAAATGAGTCGTTAAGACTATATCCACCGGCAAGTATTCTTCCAAGAATGGCATTTGAAGATATAAAACTTGGAGATTTAGAGATTCCGAAAGGATTATCAATATGGATTCCTCTTTTAGCCATTCATCATAGTGAAGAATTATGGGGCAAAGATGCAAATGAGTTCAATCCGGAAAGATTTGCAAATTCCAAACCTTTTACTTCGGGTGGTTTCATTCCTTTTGCTTCTGGCCCTCGTAATTGCATCGGACAATCTTTTGCTCTTATGGAAACTAAGATTATTCTGGCTATGCTCATCTCCAAGTTTAGTTTCACGATCTCTGATAATTATCGGCATGCACCTGTTGTCGTCCTCACTATAAAACCTAAATACGGCGTTCAAGTTTGTTTGAAGCCTTTGAATTAA 1668 41.01 FSPFSNFLTFFFLSFFLSFFLSFLLFFSFYPILMPIMLPLLLTTLALLTTSFFIFSLLYDTVSCYLLTPRRIKQKMAKQGVHGPKPRPLLGNILDVASLLSKSTSSDMPSISHDLVPRLLPHFLAWSSQFGKRFIFWNGIEPRMCLTETDLIKELLSKYSTVSGKSWLQQQGSKHFIGRGLLMANGQNWFHQRHIVAPAFVGDRLKSYAGYMVECTKEMLESIEKEVKSGRSEFEIGEYMTRLTADIISRTEFESSFEKGKQIFHLLTVLQHLCAQASRHLCFPGSRFFPSKYNREIKALKGKVEELLMEIIQSRKDCVEIGRSSSYGNDLLGMLLNEMQKKKLDGNNGLSLNLQIIMDECKTFFFAGHETTALLLTWTVMLLATNPTWQDKVRAEVMAVCGSETPSFHHLSKLSLLSMVINESLRLYPPASILPRMAFEDIKLGDLEIPKGLSIWIPLLAIHHSEELWGKDANEFNPERFANSKPFTSGGFIPFASGPRNCIGQSFALMETKIILAMLISKFSFTISDNYRHAPVVVLTIKPKYGVQVCLKPLN 555
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1077161 1081343 - MELO3C022098.2.1 Cme09g00147 337007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g00147 555 Pfam Cytochrome P450 128 529 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g00147 555 PRINTS E-class P450 group I signature 127 146 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g00147 555 PRINTS E-class P450 group I signature 492 502 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g00147 555 PRINTS E-class P450 group I signature 243 261 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g00147 555 PRINTS E-class P450 group I signature 376 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g00147 555 PRINTS E-class P450 group I signature 502 525 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g00147 555 PRINTS E-class P450 group I signature 459 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g00147 555 PRINTS E-class P450 group I signature 356 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g00147 555 Coils Coil 297 317 - -
Cme09g00147 555 Gene3D Cytochrome P450 66 555 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g00147 555 PANTHER CYTOCHROME P450 FAMILY MEMBER 42 550 - -
Cme09g00147 555 PRINTS P450 superfamily signature 367 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g00147 555 PRINTS P450 superfamily signature 502 513 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g00147 555 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g00147 555 PRINTS P450 superfamily signature 493 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g00147 555 PANTHER CYTOCHROME P450 FAMILY PROTEIN 42 550 - -
Cme09g00147 555 SUPERFAMILY Cytochrome P450 83 553 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g01675 Cme-Chr6:18404540 Cme09g00147 Cme-Chr9:1077161 0 dispersed
Cme09g00147 Cme-Chr9:1077161 Cme04g00609 Cme-Chr4:5866560 5.22E-118 dispersed
Cme10g01292 Cme-Chr10:13976239 Cme09g00147 Cme-Chr9:1077161 2.10E-103 dispersed
Cme09g00147 Cme-Chr9:1077161 Cme05g01942 Cme-Chr5:28013128 3.72E-114 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g00147 K10717 - csv:101215037 996.112