Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g00202 CTCTGTTCTCTCTCTCTCCCTCTCCCTCTCCCTCTCACTCTCTCTCCTCCCACACGCGGTGGTTCAGAGGTCTATATATATGACACTCACTTGCTTTTGGGTACCCATAAATCCAACCAAAACCTCCATACATTAAAGAGAAAGCTCCATTTCTTTCTCTTTCTTCAGACCTTCATTCCAGCTTCAATGGCGTTAGCCATGGTGATTCTTGCTCTGTTTTTACTCCTCCTTTTTTGCTCTGCTTTACTCCGATGGAATGAAGTTCGATACAGCAAAAAAGGGTTGCCTCCCGGTACAATGGGATGGCCTATTTTTGGTGAAACCACTGAGTTTCTTAAACAAGGTCCAAATTTTATGAAATCTCAAAGAGCAAGGTATGGGAGCATTTTCAAGTCGCATATTTTGGGGTGTCCTACGATTGTTTCTATGGATCCAGAAGTGAATCGATATGTTTTAATGAATGAATCAAAAGGGCTTGTTCCTGGTTACCCTCAATCCATGCTTGATATACTCGGAAAATGCAATATCGCCGCCGTACACGGCAGCGCTCATAAGCTTATGAGAGGTGCTCTGCTTGCTATTGTTAGTCCCACCATGATTAAAGATCGTCTTCTTCCTAAACTTGATGAGTTTATGCGATCCCATTTGAGTAATTGGGATAATCAAATCATTGATATACAAGAAAAAACCAAAGAGATGGCTCTCCGGTCATCTATGAAGCAGATTGCCGGATTCGAATCCGGTCCGTTATCGGAATCTTTCACCCCCGAGTTCTTTAAGTTAGTCCTCGGCACTCTCTCGCTCCCTATCGATCTTCCCGGCACGAATTACCGCCGAGGAATTCAGGCGAGGAAGAACATTATAAAACTATTGGAACAGCTGATTAAAGAGAGAAGAGATTCAAAGATTCAAAAAAATGACATGCTTGGTTATTTTATGAGTGAAGAAAACAAATATAAACTAAATGATGAAGAGATTATTGATCAAATCATTACTGTTTTGTATTCTGGCTATGAAACTGTTTCAACAACTTCAATGATGGCTGTAAAGTTCCTCCATGATCATCCCAAAGTTCTTCAGCAACTAAGATTGGAGATTCGAAATTTTCAGGAAGAACATTTAGCAATAAGAGAGAAGAAGAAAAATCCTGAGGACCCCATTGATTGGGATGATCTTAAAGCAATGAAATTCACTCGTGCGGTGATATTTGAAACATCAAGGTTGGCTACTATTGTTAATGGGGTTTTGAGGAAAACTACAAAAGATATGGAATTAAATGGCTTTCTAATTCCAAAAGGATGGAGGATTTATGTGTATACAAGAGAGATAAACTATGACCCTTTTCTTTATTCTGAACCATTCACCTTCAACCCTTGGAGATGGCTGGACAACAACTTAGAGTCCAATAATTACTTCTTCATCTTTGGTGGTGGAACTAGACTTTGTCCTGGCAAAGAATTGGGAATTACTGAGATTTCTACTTTTTTACATTACTTTGTAACTAAATACAGATGGGAAGAAGTTGGAGGAGATAAGCTCTTGAAATTTCCAAGAGTGGAAGCACCGAGTGGGTTCCACATTAGGGTTTCATCTTACTGA 1599 39.84 LCSLSLPLPLPLTLSPPTRGGSEVYIYDTHLLLGTHKSNQNLHTLKRKLHFFLFLQTFIPASMALAMVILALFLLLLFCSALLRWNEVRYSKKGLPPGTMGWPIFGETTEFLKQGPNFMKSQRARYGSIFKSHILGCPTIVSMDPEVNRYVLMNESKGLVPGYPQSMLDILGKCNIAAVHGSAHKLMRGALLAIVSPTMIKDRLLPKLDEFMRSHLSNWDNQIIDIQEKTKEMALRSSMKQIAGFESGPLSESFTPEFFKLVLGTLSLPIDLPGTNYRRGIQARKNIIKLLEQLIKERRDSKIQKNDMLGYFMSEENKYKLNDEEIIDQIITVLYSGYETVSTTSMMAVKFLHDHPKVLQQLRLEIRNFQEEHLAIREKKKNPEDPIDWDDLKAMKFTRAVIFETSRLATIVNGVLRKTTKDMELNGFLIPKGWRIYVYTREINYDPFLYSEPFTFNPWRWLDNNLESNNYFFIFGGGTRLCPGKELGITEISTFLHYFVTKYRWEEVGGDKLLKFPRVEAPSGFHIRVSSY 532
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1562626 1566251 - MELO3C022045.2.1 Cme09g00202 337062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g00202 532 Gene3D Cytochrome P450 86 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g00202 532 Coils Coil 359 379 - -
Cme09g00202 532 PRINTS E-class P450 group I signature 439 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g00202 532 PRINTS E-class P450 group I signature 472 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g00202 532 PRINTS E-class P450 group I signature 399 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g00202 532 PRINTS E-class P450 group I signature 123 142 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g00202 532 PRINTS E-class P450 group I signature 482 505 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g00202 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 475 484 IPR017972 GO:0005506|GO:0016705
Cme09g00202 532 PANTHER CYTOCHROME P450 FAMILY PROTEIN 69 530 - -
Cme09g00202 532 Pfam Cytochrome P450 96 512 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g00202 532 PRINTS P450 superfamily signature 482 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g00202 532 PRINTS P450 superfamily signature 473 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g00202 532 PRINTS P450 superfamily signature 400 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g00202 532 PRINTS P450 superfamily signature 336 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g00202 532 PANTHER CYTOCHROME P450 26 69 530 - -
Cme09g00202 532 SUPERFAMILY Cytochrome P450 89 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g01508 Cme-Chr8:14434513 Cme09g00202 Cme-Chr9:1562626 0 dispersed
Cme09g00202 Cme-Chr9:1562626 Cme10g01069 Cme-Chr10:9321685 4.68E-101 dispersed
Cme12g00155 Cme-Chr12:1530762 Cme09g00202 Cme-Chr9:1562626 1.75E-63 dispersed
Cme09g00202 Cme-Chr9:1562626 Cme01g02852 Cme-Chr1:35383310 7.62E-100 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g00202 K09590 - csv:101206858 908.286