Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme09g00204 | ATGAATGCGAATAGTTCGCGATTTCAATCGTTTGGTCAAACTGAGATCAACTGGGACAAGCTTGATAAAGCAAAATTTTATGGCGTAGGAGCTGGCCTCTTTACTGGGATTACTGTTGCACTGTACCCTGTTTCTGTTGTGAAAACGAGGATGCAGGTTGCTGTAAAGGATTCTGCCGAGAGAAATGCCCTGTCTGTTATTAAAGGCTTACTGAAGAATGATGGGGTTCCTGGTCTTTATAGAGGGTTTGGCACAGTAATCACTGGTGCAATTCCTGCAAGGATCATCTTTCTTACTGCTTTAGAGACTACCAAAGTGGGAGCCTATAAACTGGTTGAGCCATGTAAATTTTCTGAACCTACACAGGCTGCTTTGGCAAATGGGTTAGCTGGCATGACTGCATCACTTTTTTCTCAAGCTGTTTTCGTTCCAATTGATGTGATTAGTCAAAAGCTAATGGTTCAAGGATACTCCGGTAATACAAGATATACTGGGGGTTTGGATGTTGCTCGTAAACTGATAAAGTCTAATGGGATTCGGGGATTGTATAAAGGTTTTGGGTTATCTGTTATGACCTACTCTCCATCTAGTGCGGTATGGTGGGCAAGTTATGGTGCAAGTCAACGCGTCATCTGGAGGTTCTTAGGTCAAAACTCTGCTTCAGAGAAATTTGCTCCTAGCCATTCCCAACTTATTTCAGTTCAAGCTGCGGGTGGAATTATTGCAGGTGCAACAGCTTCCTGCATTACAACACCATTGGACACTATAAAGACTCGCTTACAGGTGATGGGCGATAAAGGGAAGACAGCAAGACAAATTGTTGAAAGCTTAATCGCTGAGGATGGGTGGAAAGGTTTTTATAGGGGGCTGGGTCCTCGGTTCTTCAGCATGTCAGCCTGGGGAACATCGATGATATTGGCTTACGAGTACTTGAGTAAGACTTCTTTAGCCTGCACTTTATTTATGATACATATGAACACATGCATACACACATATCTACGCCAATTAAAGACACCAATTTCTTATGTTGATGTCAACATCTTCAAGCAGAAAATATTCATCTTTTATGGGAATCCTTATAGCTAA | 1086 | 42.17 | MNANSSRFQSFGQTEINWDKLDKAKFYGVGAGLFTGITVALYPVSVVKTRMQVAVKDSAERNALSVIKGLLKNDGVPGLYRGFGTVITGAIPARIIFLTALETTKVGAYKLVEPCKFSEPTQAALANGLAGMTASLFSQAVFVPIDVISQKLMVQGYSGNTRYTGGLDVARKLIKSNGIRGLYKGFGLSVMTYSPSSAVWWASYGASQRVIWRFLGQNSASEKFAPSHSQLISVQAAGGIIAGATASCITTPLDTIKTRLQVMGDKGKTARQIVESLIAEDGWKGFYRGLGPRFFSMSAWGTSMILAYEYLSKTSLACTLFMIHMNTCIHTYLRQLKTPISYVDVNIFKQKIFIFYGNPYS | 361 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 1610689 | 1617538 | + | MELO3C022043.2.1 | Cme09g00204 | 337064 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme09g00204 | 361 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 230 | 314 | IPR018108 | - | |
Cme09g00204 | 361 | Gene3D | Mitochondrial carrier domain | 28 | 317 | IPR023395 | - | |
Cme09g00204 | 361 | Pfam | Mitochondrial carrier protein | 124 | 211 | IPR018108 | - | |
Cme09g00204 | 361 | Pfam | Mitochondrial carrier protein | 28 | 106 | IPR018108 | - | |
Cme09g00204 | 361 | Pfam | Mitochondrial carrier protein | 236 | 313 | IPR018108 | - | |
Cme09g00204 | 361 | PRINTS | Mitochondrial carrier protein signature | 39 | 53 | IPR002067 | GO:0055085 | |
Cme09g00204 | 361 | PRINTS | Mitochondrial carrier protein signature | 239 | 261 | IPR002067 | GO:0055085 | |
Cme09g00204 | 361 | PRINTS | Mitochondrial carrier protein signature | 183 | 201 | IPR002067 | GO:0055085 | |
Cme09g00204 | 361 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN | 1 | 315 | - | - | |
Cme09g00204 | 361 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 19 | 107 | IPR018108 | - | |
Cme09g00204 | 361 | SUPERFAMILY | Mitochondrial carrier | 19 | 311 | IPR023395 | - | |
Cme09g00204 | 361 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J | 1 | 315 | - | - | |
Cme09g00204 | 361 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 122 | 210 | IPR018108 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme01g02825 | Cme-Chr1:35190687 | Cme09g00204 | Cme-Chr9:1610689 | 2.34E-61 | dispersed | |
Cme06g00821 | Cme-Chr6:5624870 | Cme09g00204 | Cme-Chr9:1610689 | 9.42E-104 | dispersed | |
Cme09g00204 | Cme-Chr9:1610689 | Cme11g01725 | Cme-Chr11:25323026 | 6.10E-10 | dispersed | |
Cme09g00204 | Cme-Chr9:1610689 | Cme07g00195 | Cme-Chr7:1306859 | 3.23E-80 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme09g00204 | K15121 | - | csv:101206140 | 600.127 |