Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g00337 ACAGATCTCTCTTCCCAATACTACAAATTCACTTTTTTCTTCTCTTTTAATGGCTATATCTTCTTCCAACTGAAAACGTTTCCTATTTTTTCATATTGGTGTTCTTCCTTTTCTTTTCTGTTTTCCCTTTCATTTCCTACCCAGATGGCTCCCAGCTCTGTTGTTGTCACAATTGAGAAGCATAATAGCTTCCCTTTAGTGGAAATCAATGGCTCTGAATCTTTGTTACTTCCTGAAAAGCAAAAGGCTGCTAGTCCTAAGCAACTCACATGGGTTCTTCTTCTTAAAGCTCATAGAGCTCTGTTTTTCTTCTCATGGTTAGCTATGACTGTGAAGGCTGTTTTTGCTTCTGTTAAGAAACGCATTGCTCATGCGGGTATTAATGAAAATGATTCTAGAAACCGTGGGAAGTTGTATAGATTCATCAAGGGGTTTCTTGTTATTTCTATTGTGGGTTTGATTTTTGAAGTTGTTGCGCATTTCAAGAAGTGGAATCTAGGAATGATTCAGCCATTGGAGGTTGAAGTTCATGGCATTCTTCAATGGTTTTATGTTTCTTGGCTTTCGTTTCGTGTTGATTACATTGCTCCATTGGTATTAATGCTTTCGAAATTCTGCATTGTTTTGTTCTTGATTCAATCTCTCGATCGTCTTGTTCTCTGTTTTGGGTGCTTTTGGATTAAGTATAAGAAAATCAAACCCATGATTCAAGATGATGCTTATGATTTGGAAGATGCTTCAACTTTTCCTATGGTTCTTGTTCAAATCCCAATGTGTAATGAAAGAGAGGTCTACGCACAATCAATCGCTGCTGCTTGTGAGCTTGATTGGCCAAAGAATCGGATTTTGATTCAAGTTCTTGATGATTCAGACGATGGAAATCTTCAGCGTTTGATCAAAGAAGAAGTTCTGTCATGGAATGAAAAGGGTGTTAATATTGTTTATAGACATAGATTGATTCGAACTGGATACAAAGCTGGGAACCTCAAGTCCGCCATGGCTTGTGATTATGTTAAAGATTATGAGTTTGTAGCTATTTTAGATGCAGATTTCCAGCCCAATCCAGATTTCCTTAAACTATGTATCCCTCATTTCAAGGGAAATCCTGAGCTGGGTCTTGTTCAAGCTCGTTGGGCGTTTGTTAACAAGGAAGAGAACTTACTTACAAGACTCCAAAACATCAACTTGTGCTTCCACTTTGAAGTGGAGCAGCAAGTTAATGGAGTTTTCCTGAATTTCTTTGGATTCAATGGAACTGCAGGCGTTTGGAGAGTGAAAGCACTTGAAGAATCCGGTGGCTGGCTCGAGCGAACAACCGTGGAAGACATGGATATTGCTGTTCGAGCTCACTTGAAGGGATGGAAATTCATCTTCCTCAATGATGTTAAAGTGCTTTGTGAATTGCCTGAATCATATGAAGCTTATAAGAAACAGCAACACCGTTGGCATTCTGGTCCAATGCAGCTCTTCAGATTATGCCTTCCTTCTATCATTACTTCAAAGATATCAATATGGAAGAAGACCAACTTGATATTTCTGTTCTTTCTCTTGAGAAAACTCATACTTCCATTTTACTCATTCACTTTGTTTTGCATCATACTTCCATTAACAATGTTTATTCCAGAAGCAGAATTGCCTCTTTGGGTAATCTGCTATATCCCAGTTTTCATGTCCTTCCTAAACATTCTTCCATCCCCAAAATCCTTCCCCTTCTTGATCCCATATCTCTTGTTTGAAAACACCATGTCCGTCACAAAGTTCAATGCCATGGTTTCGGGGCTATTCCAGCTTGGAAGTTCATACGAATGGGTAGTGACAAAAAAGACAGGACGATCATCCGAATCCGACTTCTTAGCATTCGCAGAACGAGAGTCGAAAACATCAAACGATGAGAAGATTTTAAGGAGACATTCGGAGTCGGGGCTGGAGTTGTTGAGTAAATTGAACCAACAAGAGATGAAGCAAAAAGTGGTTTCAAAGAAGAAAAGAAACAAGGTGTATAGAAAAGAACTTGCTCTTGCTTTTCTATTGCTCACTGCATCAGCTAGAAGCTTGCTGTCAGAACATGGAGTTCATTTCTATTTCTTGCTTTTTCAAGGTTTGTCATTCCTGGTGGTGGGTTTGGACTTGATTGGTGAACAAATGAACTGA 2151 39.05 TDLSSQYYKFTFFFSFNGYIFFQLKTFPIFSYWCSSFSFLFSLSFPTQMAPSSVVVTIEKHNSFPLVEINGSESLLLPEKQKAASPKQLTWVLLLKAHRALFFFSWLAMTVKAVFASVKKRIAHAGINENDSRNRGKLYRFIKGFLVISIVGLIFEVVAHFKKWNLGMIQPLEVEVHGILQWFYVSWLSFRVDYIAPLVLMLSKFCIVLFLIQSLDRLVLCFGCFWIKYKKIKPMIQDDAYDLEDASTFPMVLVQIPMCNEREVYAQSIAAACELDWPKNRILIQVLDDSDDGNLQRLIKEEVLSWNEKGVNIVYRHRLIRTGYKAGNLKSAMACDYVKDYEFVAILDADFQPNPDFLKLCIPHFKGNPELGLVQARWAFVNKEENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRVKALEESGGWLERTTVEDMDIAVRAHLKGWKFIFLNDVKVLCELPESYEAYKKQQHRWHSGPMQLFRLCLPSIITSKISIWKKTNLIFLFFLLRKLILPFYSFTLFCIILPLTMFIPEAELPLWVICYIPVFMSFLNILPSPKSFPFLIPYLLFENTMSVTKFNAMVSGLFQLGSSYEWVVTKKTGRSSESDFLAFAERESKTSNDEKILRRHSESGLELLSKLNQQEMKQKVVSKKKRNKVYRKELALAFLLLTASARSLLSEHGVHFYFLLFQGLSFLVVGLDLIGEQMN 716
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2882557 2885104 + MELO3C021517.2.1 Cme09g00337 337197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g00337 716 Pfam Glycosyl transferase family group 2 344 550 IPR001173 -
Cme09g00337 716 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 242 469 IPR029044 -
Cme09g00337 716 PANTHER - 49 715 - -
Cme09g00337 716 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 4 49 715 - -
Cme09g00337 716 SUPERFAMILY Nucleotide-diphospho-sugar transferases 252 552 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g00326 Cme-Chr4:2611900 Cme09g00337 Cme-Chr9:2882557 0 dispersed
Cme08g01230 Cme-Chr8:8748148 Cme09g00337 Cme-Chr9:2882557 6.85E-137 dispersed
Cme09g00337 Cme-Chr9:2882557 Cme11g01878 Cme-Chr11:26970018 1.03E-136 dispersed
Cme09g00337 Cme-Chr9:2882557 Cme07g00257 Cme-Chr7:1672646 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g00337 K20887 - csv:101208151 1273.07