Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g00340 ATGGCGTTAACCGGAAGAAGCTTAATGGAAGGAGTTCTTCCATTTCCGGCGATGATGGCGATGGAGTGTATAAACGTCGGTCTCAACACACTTTTTAAAGCCGCCACCGCCACCGGGATGAGCCACCACGTGTTCGTCGTTTACTCTTACTCATTCGCCGCCCTTCTGCTCCTCCCTTCTCCGTTCATCTCTCGAAGATCCACTCGTCTTCCACCTCTCAATTTCTCTGTAATTTCAAAGATTGCTCTGCTTGGGTTAATCGGTTCATGTTCGCAGATTATGGGATACACAGGAATCAATTATAGTTCTCCAACACTTGCTTCCGCCATCAGCAACCTTGTTCCTGCTTTCACTTTCATTCTCGCCATCATTTTCAGGATGGAGAAAGTGGTATTGAAAAGCAATAGCAGTCAAGCAAAAGTGATGGGCACAATAATATCAATATCAGGGGCATTTGTGGTAACATTTTACAAGGGTCCAAGAATCATATTCTCATCTTCACCAACCATTTCTCTTTCACTTCATCACAATTCACAACAACTATCCTCTTCTGATTCTAATTGGGTTATTGGTAGCCTTCTCTTGACTGCTGAATATATCCTTGTTCCACTTTGGTACATTGTTCAGACAAAAATAATGAAGGAATACCCAGAAGAGGCAACAGTGGTCTTCTTCTACAACTTAACTGTGGGCATCATAGCTGCATTTGTAGGTTTTATTTTAGAGAAAGATCCAAGTGCTTGGATTTTGAGGCAAAATACAGCATTAGCCTCTGTTTTATGCTCTGGACTTTTTGGATCATGTTTAAACAATACAGTTCATACATGGGCACTCCGATTGAAAGGGCCGGTGTTTGTAGCAATGTTTAAGCCGTTGTCGATTGTTGTTGCTATCGTAATGGGTGTTCTGTTTCTTGGTGATTCTCTATATCTTGGAAGTCTTATTGGAGCATCCATAATATCCATAGGGTTTTATACTGTAATGTGGGGAAAAGCAAAAGAAGAAATGGGTGTTGGAGAAGAAAAACAAGAAGGCCATAGCCATAATAATCTTGATGGTAATAAGGAATCAAATGAAGATCAGAGAGTACCTCTTCTTGGAAGCTACAACAGATACAGTGAAGATCATGTATGA 1134 41.09 MALTGRSLMEGVLPFPAMMAMECINVGLNTLFKAATATGMSHHVFVVYSYSFAALLLLPSPFISRRSTRLPPLNFSVISKIALLGLIGSCSQIMGYTGINYSSPTLASAISNLVPAFTFILAIIFRMEKVVLKSNSSQAKVMGTIISISGAFVVTFYKGPRIIFSSSPTISLSLHHNSQQLSSSDSNWVIGSLLLTAEYILVPLWYIVQTKIMKEYPEEATVVFFYNLTVGIIAAFVGFILEKDPSAWILRQNTALASVLCSGLFGSCLNNTVHTWALRLKGPVFVAMFKPLSIVVAIVMGVLFLGDSLYLGSLIGASIISIGFYTVMWGKAKEEMGVGEEKQEGHSHNNLDGNKESNEDQRVPLLGSYNRYSEDHV 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2897049 2902561 - MELO3C021520.2.1 Cme09g00340 337200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g00340 377 MobiDBLite consensus disorder prediction 338 363 - -
Cme09g00340 377 Pfam EamA-like transporter family 202 328 IPR000620 GO:0016020|GO:0016021
Cme09g00340 377 Pfam EamA-like transporter family 26 155 IPR000620 GO:0016020|GO:0016021
Cme09g00340 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 332 - -
Cme09g00340 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 158 - -
Cme09g00340 377 PANTHER WAT1-RELATED PROTEIN 11 349 - -
Cme09g00340 377 PANTHER WAT1-RELATED PROTEIN 11 349 IPR030184 GO:0016021|GO:0022857
Cme09g00340 377 MobiDBLite consensus disorder prediction 338 359 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme04g01914 Cme09g00340 CCT
Cme04g01914 Cme09g00340 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g01913 Cme-Chr4:26819318 Cme09g00340 Cme-Chr9:2897049 1.27E-34 dispersed
Cme04g01914 Cme-Chr4:26822063 Cme09g00340 Cme-Chr9:2897049 3.45E-84 dispersed
Cme09g00340 Cme-Chr9:2897049 Cme08g01047 Cme-Chr8:6815908 1.78E-58 dispersed
Cme09g00340 Cme-Chr9:2897049 Cme09g00341 Cme-Chr9:2908395 2.34E-83 tandem
Cme04g01911 Cme-Chr4:26800327 Cme09g00340 Cme-Chr9:2897049 9.43E-96 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g00340 - - csv:101208880 701.434