Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme09g00397 | ATGGCTGCTTCCTCTGTGCCGGAGAGTGCCGGGGAGGGCGTGGAATCGGTTGATTTGGTTCAAAATCTCCGGCTTGGTGCAATGTTTGGGATTTGGTATCTCTTGAATATCTACTACAATATTTTCAACAAACAGGTTTTGAAAGCTTTTCCGTTTCCAACTACGGTGACAGCTTTCCAGTTCGGGTGTGGTACGATCATAGTAAACTTAATGTGGGCTCTTAATTTTCATCAGAGACCCAAGATCAGTCCATCCCAGTTTGCTGCCATTCTTCCGGTGGCTGTAGCGCACACAATGGGAAACATATTAACCAATGTGAGTCTTGGGAGAGTGGCGGTTTCATTTACTCACACCATCAAAGCAATGGAGCCATTTTTCACCGTCCTTCTCTCTGCTTTGTTTTTGGCTGAGAGGCCCACTTTTTGGATTGTTTTTTCTCTGGTTCCAGTTGTAGGAGGAGTGGCACTCGCTTCTTTTACTGAAGCCTCATTTAATTGGATTGGCTTCAGCAGTGCCATGGCTTCAAATCTTACCAATCAATCACGTAATATCCTCAGCAAAAAGCTCATGGTCCACAAAGAGGCATTGGACAACATCAATTTGTTCTCTGTAATTACCATCATTTCGTTTATCCTGCTGGTTCCCTCGGCTCTTCTCCTTGAAGGCACTAAATTTAGTCCTTCATACTTGAAATTAGCTGCAAATCAAGGGTTGAATATTAGAGAACTATGCATTAGGTTGCTTCTATCTGGCATCTGTTTTCATAGTTATCAGCAGGTTTCATATTCAATACTACAAGAAATTTCACCGGTGACCCATGCAGTAGGAAATTCTTTGAAGCGAGTGGTGGTTATAGTGTCTTCGGTTATTTTCTTCCAAACAACAGTCTCACCTCTAAACGCCTTCGGAACGGGCATAGCTCTAATGGGAGTATTCTTGTATTCAAGGGCTAAGCGTATGAACTCAAAACTCAAGTCTTTGTAA | 984 | 42.78 | MAASSVPESAGEGVESVDLVQNLRLGAMFGIWYLLNIYYNIFNKQVLKAFPFPTTVTAFQFGCGTIIVNLMWALNFHQRPKISPSQFAAILPVAVAHTMGNILTNVSLGRVAVSFTHTIKAMEPFFTVLLSALFLAERPTFWIVFSLVPVVGGVALASFTEASFNWIGFSSAMASNLTNQSRNILSKKLMVHKEALDNINLFSVITIISFILLVPSALLLEGTKFSPSYLKLAANQGLNIRELCIRLLLSGICFHSYQQVSYSILQEISPVTHAVGNSLKRVVVIVSSVIFFQTTVSPLNAFGTGIALMGVFLYSRAKRMNSKLKSL | 327 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 3569311 | 3577922 | - | MELO3C021558.2.1 | Cme09g00397 | 337257 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme09g00397 | 327 | PANTHER | SOLUTE CARRIER FAMILY 35 | 2 | 321 | - | - | |
| Cme09g00397 | 327 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 240 | 319 | - | - | |
| Cme09g00397 | 327 | Pfam | Triose-phosphate Transporter family | 23 | 315 | IPR004853 | - | |
| Cme09g00397 | 327 | PANTHER | PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC | 2 | 321 | - | - | |
| Cme09g00397 | 327 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 70 | 160 | - | - | |
| Cme09g00397 | 327 | TIGRFAM | tpt: Tpt phosphate/phosphoenolpyruvate translocator | 23 | 322 | IPR004696 | GO:0016021|GO:0022857|GO:0055085 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme09g00397 | Cme-Chr9:3569311 | Cme07g00856 | Cme-Chr7:8494615 | 2.86E-27 | dispersed | |
| Cme08g00388 | Cme-Chr8:2420777 | Cme09g00397 | Cme-Chr9:3569311 | 7.45E-68 | transposed | |
| Cme10g00361 | Cme-Chr10:2327877 | Cme09g00397 | Cme-Chr9:3569311 | 8.11E-61 | transposed | |
| Cme12g01691 | Cme-Chr12:23801716 | Cme09g00397 | Cme-Chr9:3569311 | 1.52E-145 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme09g00397 | K15283 | - | csv:101217436 | 616.69 |