Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme09g00431 | ATGGGGTCCGGTAATGAGTTATGTTCACAAGAGTTTGATTTGGATGCTAAGTGGCTGGTTGATCCGAAGCAAATCTTGGTTGGGCCAAGGATTGGGGAGGGCGCGCACGGCAAAGTGCACAAGGGGAAAAGGAAACCACATCAGAAAGGACGACCAAGGAGCAAGGATGGAAATTTTATTCTTCTGGATGGGTGCAATGATAATTCTTTTGCACCATCCAGATATAAAGACCAAAATGTTGCAATTAAAATAATTCGGAAAGGTGAAACCCCAGAAGAAATTACGAAAACTGAGGCACGCTTTGCTCGGGAGGTCGCTATGTTATCCAAAGTTCAACACAAGAATCTTGCAAAGGTTTTTATAGGTGCTTGCAAGGAGCCTATTATGGTGATAGTAACTGAGCTTCTTTCAGGCGGAACATTACGAAAGTACCTGTTGAGTATAAGGCCAAGGTGCTTGGACTTCAGTGAGGCAGTTGGCTTTGCCTTAGATATTGCCCGTGCAATGGATTGCTTGCATTCCCATGGGATCATTCACCGTGACCTCAAACCTGACCACAAAACTGTTAAACTTGCTGATTTTGGCCTTGCTAGAGAAGAGTCAGTAACAGAGATGATGACAGCTGAAACTGGGACTTACCGATGGATGGCTCCAGAGCTATACAGTACAGTCACTTTACGAAATGGAGAGAAGAAGCATTACAATCACAAGGTGGATGTTTACAGCTTTGGAATTGTATTCTGGGAGCTTATCCAAAACAAGTTGCCTTTTGAAGGCATGTCAAATCTGCAAGCCGCATATGCGGCTGCTTTTAAGAATTTACGACCGAGTGCTGAGAACCTCCCAGCAGATTTGGCACCAATTGTGACTTCCTGTTGGAAAGAGGATCCGAACGATCGGCCTAACTTCAACCAAATCATACAGATGCTCTTGAAATGTCTATCCACCATTCCACAACCAGAATATGTTCCACCACCAACTATGCACCCACCTGATAATGCAGTGCTGCCACCAGAGTCTCCTGGAACAAGTTCTTTGATGGCAACCACAAGACGTGGCACTGGGGAAGTCATGAACAGTGAACTAGGAGAGAAACCGACCGGTTTCTTCTCGTGTTTCGCTGGT | 1125 | 45.24 | MGSGNELCSQEFDLDAKWLVDPKQILVGPRIGEGAHGKVHKGKRKPHQKGRPRSKDGNFILLDGCNDNSFAPSRYKDQNVAIKIIRKGETPEEITKTEARFAREVAMLSKVQHKNLAKVFIGACKEPIMVIVTELLSGGTLRKYLLSIRPRCLDFSEAVGFALDIARAMDCLHSHGIIHRDLKPDHKTVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRNGEKKHYNHKVDVYSFGIVFWELIQNKLPFEGMSNLQAAYAAAFKNLRPSAENLPADLAPIVTSCWKEDPNDRPNFNQIIQMLLKCLSTIPQPEYVPPPTMHPPDNAVLPPESPGTSSLMATTRRGTGEVMNSELGEKPTGFFSCFAG | 375 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 4118767 | 4122834 | + | MELO3C021586.2.1 | Cme09g00431 | 337291 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme09g00431 | 375 | PANTHER | BNAA06G32000D PROTEIN | 73 | 353 | - | - | |
Cme09g00431 | 375 | PIRSF | TyrPK_CSF1-R | 14 | 42 | - | - | |
Cme09g00431 | 375 | PIRSF | TyrPK_CSF1-R | 140 | 347 | - | - | |
Cme09g00431 | 375 | PANTHER | BNAA06G32000D PROTEIN | 1 | 71 | - | - | |
Cme09g00431 | 375 | Gene3D | Phosphorylase Kinase; domain 1 | 17 | 138 | - | - | |
Cme09g00431 | 375 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 73 | 353 | - | - | |
Cme09g00431 | 375 | PRINTS | Tyrosine kinase catalytic domain signature | 281 | 303 | IPR001245 | GO:0004672|GO:0006468 | |
Cme09g00431 | 375 | PRINTS | Tyrosine kinase catalytic domain signature | 238 | 260 | IPR001245 | GO:0004672|GO:0006468 | |
Cme09g00431 | 375 | PRINTS | Tyrosine kinase catalytic domain signature | 133 | 146 | IPR001245 | GO:0004672|GO:0006468 | |
Cme09g00431 | 375 | PRINTS | Tyrosine kinase catalytic domain signature | 171 | 189 | IPR001245 | GO:0004672|GO:0006468 | |
Cme09g00431 | 375 | CDD | STKc_MAP3K-like | 31 | 310 | - | - | |
Cme09g00431 | 375 | SUPERFAMILY | Protein kinase-like (PK-like) | 17 | 341 | IPR011009 | - | |
Cme09g00431 | 375 | MobiDBLite | consensus disorder prediction | 37 | 51 | - | - | |
Cme09g00431 | 375 | MobiDBLite | consensus disorder prediction | 31 | 57 | - | - | |
Cme09g00431 | 375 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 1 | 71 | - | - | |
Cme09g00431 | 375 | Pfam | Protein tyrosine and serine/threonine kinase | 29 | 310 | IPR001245 | GO:0004672|GO:0006468 | |
Cme09g00431 | 375 | Gene3D | Transferase(Phosphotransferase) domain 1 | 139 | 321 | - | - | |
Cme09g00431 | 375 | ProSiteProfiles | Protein kinase domain profile. | 25 | 322 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cme04g01834 | Cme09g00431 | CCT | |
Cme04g01834 | Cme09g00431 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme02g02015 | Cme-Chr2:26338340 | Cme09g00431 | Cme-Chr9:4118767 | 1.21E-175 | dispersed | |
Cme04g02778 | Cme-Chr4:32921716 | Cme09g00431 | Cme-Chr9:4118767 | 1.50E-135 | dispersed | |
Cme08g00827 | Cme-Chr8:5484208 | Cme09g00431 | Cme-Chr9:4118767 | 5.26E-79 | dispersed | |
Cme09g00431 | Cme-Chr9:4118767 | Cme05g01215 | Cme-Chr5:19656771 | 4.45E-64 | dispersed | |
Cme04g01834 | Cme-Chr4:26066055 | Cme09g00431 | Cme-Chr9:4118767 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
65146 | PF07714 | PK_Tyr_Ser-Thr | 3.90E-49 | CL0016 | Cme | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme09g00431 | - | - | csv:101220915 | 662.529 |