Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g00431 ATGGGGTCCGGTAATGAGTTATGTTCACAAGAGTTTGATTTGGATGCTAAGTGGCTGGTTGATCCGAAGCAAATCTTGGTTGGGCCAAGGATTGGGGAGGGCGCGCACGGCAAAGTGCACAAGGGGAAAAGGAAACCACATCAGAAAGGACGACCAAGGAGCAAGGATGGAAATTTTATTCTTCTGGATGGGTGCAATGATAATTCTTTTGCACCATCCAGATATAAAGACCAAAATGTTGCAATTAAAATAATTCGGAAAGGTGAAACCCCAGAAGAAATTACGAAAACTGAGGCACGCTTTGCTCGGGAGGTCGCTATGTTATCCAAAGTTCAACACAAGAATCTTGCAAAGGTTTTTATAGGTGCTTGCAAGGAGCCTATTATGGTGATAGTAACTGAGCTTCTTTCAGGCGGAACATTACGAAAGTACCTGTTGAGTATAAGGCCAAGGTGCTTGGACTTCAGTGAGGCAGTTGGCTTTGCCTTAGATATTGCCCGTGCAATGGATTGCTTGCATTCCCATGGGATCATTCACCGTGACCTCAAACCTGACCACAAAACTGTTAAACTTGCTGATTTTGGCCTTGCTAGAGAAGAGTCAGTAACAGAGATGATGACAGCTGAAACTGGGACTTACCGATGGATGGCTCCAGAGCTATACAGTACAGTCACTTTACGAAATGGAGAGAAGAAGCATTACAATCACAAGGTGGATGTTTACAGCTTTGGAATTGTATTCTGGGAGCTTATCCAAAACAAGTTGCCTTTTGAAGGCATGTCAAATCTGCAAGCCGCATATGCGGCTGCTTTTAAGAATTTACGACCGAGTGCTGAGAACCTCCCAGCAGATTTGGCACCAATTGTGACTTCCTGTTGGAAAGAGGATCCGAACGATCGGCCTAACTTCAACCAAATCATACAGATGCTCTTGAAATGTCTATCCACCATTCCACAACCAGAATATGTTCCACCACCAACTATGCACCCACCTGATAATGCAGTGCTGCCACCAGAGTCTCCTGGAACAAGTTCTTTGATGGCAACCACAAGACGTGGCACTGGGGAAGTCATGAACAGTGAACTAGGAGAGAAACCGACCGGTTTCTTCTCGTGTTTCGCTGGT 1125 45.24 MGSGNELCSQEFDLDAKWLVDPKQILVGPRIGEGAHGKVHKGKRKPHQKGRPRSKDGNFILLDGCNDNSFAPSRYKDQNVAIKIIRKGETPEEITKTEARFAREVAMLSKVQHKNLAKVFIGACKEPIMVIVTELLSGGTLRKYLLSIRPRCLDFSEAVGFALDIARAMDCLHSHGIIHRDLKPDHKTVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRNGEKKHYNHKVDVYSFGIVFWELIQNKLPFEGMSNLQAAYAAAFKNLRPSAENLPADLAPIVTSCWKEDPNDRPNFNQIIQMLLKCLSTIPQPEYVPPPTMHPPDNAVLPPESPGTSSLMATTRRGTGEVMNSELGEKPTGFFSCFAG 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4118767 4122834 + MELO3C021586.2.1 Cme09g00431 337291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g00431 375 PANTHER BNAA06G32000D PROTEIN 73 353 - -
Cme09g00431 375 PIRSF TyrPK_CSF1-R 14 42 - -
Cme09g00431 375 PIRSF TyrPK_CSF1-R 140 347 - -
Cme09g00431 375 PANTHER BNAA06G32000D PROTEIN 1 71 - -
Cme09g00431 375 Gene3D Phosphorylase Kinase; domain 1 17 138 - -
Cme09g00431 375 PANTHER SERINE-THREONINE PROTEIN KINASE 73 353 - -
Cme09g00431 375 PRINTS Tyrosine kinase catalytic domain signature 281 303 IPR001245 GO:0004672|GO:0006468
Cme09g00431 375 PRINTS Tyrosine kinase catalytic domain signature 238 260 IPR001245 GO:0004672|GO:0006468
Cme09g00431 375 PRINTS Tyrosine kinase catalytic domain signature 133 146 IPR001245 GO:0004672|GO:0006468
Cme09g00431 375 PRINTS Tyrosine kinase catalytic domain signature 171 189 IPR001245 GO:0004672|GO:0006468
Cme09g00431 375 CDD STKc_MAP3K-like 31 310 - -
Cme09g00431 375 SUPERFAMILY Protein kinase-like (PK-like) 17 341 IPR011009 -
Cme09g00431 375 MobiDBLite consensus disorder prediction 37 51 - -
Cme09g00431 375 MobiDBLite consensus disorder prediction 31 57 - -
Cme09g00431 375 PANTHER SERINE-THREONINE PROTEIN KINASE 1 71 - -
Cme09g00431 375 Pfam Protein tyrosine and serine/threonine kinase 29 310 IPR001245 GO:0004672|GO:0006468
Cme09g00431 375 Gene3D Transferase(Phosphotransferase) domain 1 139 321 - -
Cme09g00431 375 ProSiteProfiles Protein kinase domain profile. 25 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme04g01834 Cme09g00431 CCT
Cme04g01834 Cme09g00431 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g02015 Cme-Chr2:26338340 Cme09g00431 Cme-Chr9:4118767 1.21E-175 dispersed
Cme04g02778 Cme-Chr4:32921716 Cme09g00431 Cme-Chr9:4118767 1.50E-135 dispersed
Cme08g00827 Cme-Chr8:5484208 Cme09g00431 Cme-Chr9:4118767 5.26E-79 dispersed
Cme09g00431 Cme-Chr9:4118767 Cme05g01215 Cme-Chr5:19656771 4.45E-64 dispersed
Cme04g01834 Cme-Chr4:26066055 Cme09g00431 Cme-Chr9:4118767 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65146 PF07714 PK_Tyr_Ser-Thr 3.90E-49 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g00431 - - csv:101220915 662.529