Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g00508 ATGGCGGGAAAGGGAGAAGGTCCGGCCATCGGTATCGATCTCGGTACCACTTACTCTTGTGTTGGAGTTTGGCAACATGATCGTGTTGAGATTATTGCTAATGATCAAGGTAATCGGACCACGCCCTCCTATGTCGCGTTCACTGATACTGAACGACTCATCGGTGACGCTGCCAAGAACCAAGTCGCTATGAATCCTCTCAACACCGTCTTTGATGCGAAGCGTTTGATTGGAAGGAGATTCTCCGATCCTTCGGTTCAGAGCGATATGAAATTATGGCCATTCAAGGTGATCGCCGGTCCAGGGGACAAGCCTATGATCGTCGTCAATTACAAAGGCGAAGAGAAGCAATTTGCAGCTGAGGAAATCTCATCCATGGTTCTTACAAAAATGCGTGAGATTGCAGAAGCTTACCTTGGTTCCTCCGTGAAGAACGCCGTCGTCACCGTTCCTGCTTACTTCAATGACTCTCAACGTCAAGCCACCAAGGACGCCGGAGTCATCGCCGGTCTTAATGTTATGCGTATCATCAACGAGCCTACAGCTGCAGCCATTGCTTATGGACTCGACAAAAAGGCGACCAGCGTTGGCGAGAAGAATGTTCTGATTTTCGATCTGGGTGGAGGAACATTTGATGTCTCTCTCCTCACAATCGAGGAAGGAATTTTCGAGGTGAAGGCAACCGCCGGTGACACCCATCTTGGCGGTGAGGATTTCGACAACAGATTAGTTAACCATTTCGTTCAGGAATTCAAGAGGAAGCATAAGAAAGACATCAGTGGAAATCCAAGGGCTCTCAGGAGATTGAGAACTGCTTGTGAAAGAGCCAAGAGAACCCTTTCATCTACTGCCCAAACAACAATCGAAATCGATTCTCTGTACGAAGGAATCGATTTCTACACAACAATTACTCGCGCTAGATTCGAAGAACTCAACATGGATCTCTTCCGAAAGTGTATGGAGCCAGTTGAGAAATGTTTGAGAGATGCAAAGATGGACAAAAGCTCCGTCCATGATGTTGTTCTTGTAGGTGGTTCTACAAGAATTCCAAAGGTACAACAGCTATTGCAAGATTTCTTCAATGGCAAGGAGCTTTGCAAGAGTATCAACCCTGATGAGGCTGTTGCTTATGGAGCTGCTGTTCAAGCCGCCATCTTGAGTGGTGAAGGAAACGAGAAAGTGCAAGACCTTCTTCTTTTGGATGTTACTCCTCTATCCCTTGGTTTAGAAACTGCAGGAGGTGTAATGACAGTTTTGATTCCGAGGAACACGACGATCCCGACAAAGAAGGAGCAAGTTTTCTCTACTTACTCAGACAACCAACCTGGTGTTCTTATTCAAGTCTACGAAGGAGAAAGAACAAGAACAAAAGACAACAACTTGTTGGGTAAGTTTGAACTTTCAGGAATTCCTCCAGCTCCTAGAGGTGTTCCTCAAATCACTGTTTGCTTCGACATCGACGCAAACGGTATCCTTAATGTATCGGCCGAGGATAAAACCACCGGACAAAAGAACAAGATCACGATTACCAACGACAAAGGGAGGTTATCGAAAGAAGAGATTGAGAAATTGGTTCAAGAAGCAGAGAAATTCAAGGCAGAGGACGAAGAACACAAGAAGAAAGTCGAATCCAAGAATGCTTTAGAAAACTATGCTTACAATATGAGGAACACAATCAGAGATGAAAAGATTAGCGGTAAGCTTGCTCCGGCTGATAAGAAGAAGATTGAAGATGCAGTTGAACAAGCAATTCAGTGGCTAGATAGCAATCAGCTGGCTGAATCAGATGAATTTGAAGACAAGATGAAGGAACTTGAGTCAATTTGCAACCCCATCATAGCCAAGATGTATCAGGGCGGTGCCGATATGGGCAGCGCTGCCATGAACGATGATGCTCCTCCTTCTGGTGGCAGTGGCGCTGGTCCTAAGATTGAAGAAGTCGATTAA 1947 45.56 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPLNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGPGDKPMIVVNYKGEEKQFAAEEISSMVLTKMREIAEAYLGSSVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKLVQEAEKFKAEDEEHKKKVESKNALENYAYNMRNTIRDEKISGKLAPADKKKIEDAVEQAIQWLDSNQLAESDEFEDKMKELESICNPIIAKMYQGGADMGSAAMNDDAPPSGGSGAGPKIEEVD 648
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4915047 4918065 + MELO3C021648.2.1 Cme09g00508 337368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g00508 648 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Cme09g00508 648 Gene3D - 71 126 - -
Cme09g00508 648 Gene3D - 192 366 - -
Cme09g00508 648 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Cme09g00508 648 Gene3D Actin; Chain A, domain 4 235 318 - -
Cme09g00508 648 Gene3D - 10 384 - -
Cme09g00508 648 Gene3D - 545 648 IPR029048 -
Cme09g00508 648 PRINTS 70kDa heat shock protein signature 8 21 - -
Cme09g00508 648 PRINTS 70kDa heat shock protein signature 36 48 - -
Cme09g00508 648 PRINTS 70kDa heat shock protein signature 58 66 - -
Cme09g00508 648 PRINTS 70kDa heat shock protein signature 146 166 - -
Cme09g00508 648 PRINTS 70kDa heat shock protein signature 209 219 - -
Cme09g00508 648 PRINTS 70kDa heat shock protein signature 337 353 - -
Cme09g00508 648 PRINTS 70kDa heat shock protein signature 369 389 - -
Cme09g00508 648 PRINTS 70kDa heat shock protein signature 396 415 - -
Cme09g00508 648 PRINTS 70kDa heat shock protein signature 477 493 - -
Cme09g00508 648 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Cme09g00508 648 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Cme09g00508 648 PANTHER HEAT SHOCK PROTEIN 70KDA 1 628 IPR013126 GO:0005524|GO:0140662
Cme09g00508 648 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Cme09g00508 648 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Cme09g00508 648 Coils Coil 514 541 - -
Cme09g00508 648 MobiDBLite consensus disorder prediction 622 648 - -
Cme09g00508 648 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524|GO:0140662
Cme09g00508 648 SUPERFAMILY Actin-like ATPase domain 198 388 IPR043129 -
Cme09g00508 648 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 621 IPR029048 -
Cme09g00508 648 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 544 IPR029047 -
Cme09g00508 648 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 628 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme05g01223 Cme-Chr5:19797789 Cme09g00508 Cme-Chr9:4915047 0 dispersed
Cme06g00615 Cme-Chr6:3937542 Cme09g00508 Cme-Chr9:4915047 3.91E-90 dispersed
Cme08g02394 Cme-Chr8:30800204 Cme09g00508 Cme-Chr9:4915047 0 dispersed
Cme09g00508 Cme-Chr9:4915047 Cme09g00519 Cme-Chr9:4992540 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g00508 K03283 - csv:101211905 1251.5