Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g00518 ATGGACTTTGCCGACGAGCTTACGGCCGGAGCCACCGCCTCCAATTCCAACCCCCACAAGCCCTCCGATACCAGAGACAGCGGCGAGCTCTCATCCTCCGACAACGATACCGAAGATGTACATCCTGTATTTTCAAACATGCCTGCTTCATTTGCACCGCCAATGTCTCCCATTCTTCCTCTGCAAAGTAAATGTAATGTAGCGATTCAGGCTGATATGGATGATAAATTGGAGACAATTCAAAATATATGTCAGAAAATTGTGGACACCACAAACTTGTACTCATTTTCTAAATTGGATGACCAGCAAGTATATTCTCTTATGAGGCTGAGGGAAATTTCTCATCGGATTGTTAATGAGCGTGATTCAAGGGTGACAAGAAATGATGTGATTAGTGCTATGTGCTTTTACATCAACAGGCTGGCAGGTAAGTGCAAGGATATTGTTGACATTATGAATAAGATGTCCTATAAAGACTTGGATGACCAGCAGATGCAACAGCTATCGAGATTGAAAGAGCTTCTTTGTGGGATTGTTGATGGAGCCAAAGATGTGGAAACTGAACCTTCCCGTATAGTTGAACAGGGCATGGTAAGTGATATCTGGATGACAGAGAGTTTGGAAGTTGAGCCAATCGATTCCTGCAATGATGACATACCACTCGGAGAGACACAAATTGTAGCGATTGAAGATAAACAGGCAGTAGCTGAAGCTAGGCTCGCGAATCAATATTGTGACATGTCGCATGTTAAACACTCTATCAGTTGGCCTCCAAATGGTAGCTTAACCTTAGAGTGGGTTGTAGAGATGATGAAAACTCTTGAACTGTCTTCAAGAAACTACACTCCTTCAGAATTTCAACTTATAATGCCAGTTTCCGTGGTAGATTCAATTCTTAATGTAGCTGCAAGTATCCTTCACAAGGAACCAAACTGCCTGGAAATTGACTGCCATGGAGAAGTTTCAAACGTGGTTATAGTTGGTGACATTCATGGACATTATCATGACTTACTTCATCTATTTGAACTTGCTAATTTTCCATCTGAAAGCCAGTATTACGTTTTTAATGGTAATTATGTGGACAGAGGAGCATGGGGACTCGAGGTCTTTTTGGTTTTATTGGCGTGGAAGATCTTGATGCCTGATAGAGTATATCTGCTCCGTGGAAATCATGAAACGAGATTTTGTACATCATCCTACGGTTTTGAGAAAGAAGTAAGGACAAAATATGGCGAGCAAGGTGAAAAAGTATATCACAGGTGCTTGGAAACATTTAAGGAACTTCCTTTGGCTGCAATTATTGCTGGAAAAGTATATACGACACATGGAGGGTTATTTCGTAAGCCATGCAATCCTGATGTGCAGAATGACAAGGAAACAAGGACACGGAAGCTGGAGATTGGATCCTTGCAAGACTTATCTAAGCTTGAAAGGTTTTTCGTTGATATTCCAACTAAAGATGAAGATCCAAATATAATATTGGCAGATGTATTGTGGTCAAATCCTTCTAAGGTAGATGGTTTAAGGGAAAATCAAGCCAGAGGAGTAGGTCTATTATGGGGTCCTGATTTTACAGAAGCATTCTTAAAGCTGTCGAATTTAAAGTTGATAATTAGGTCACATGAAGGCCCAGATTCAAGGGATGGTAAGATAGATTTTGATGATATGATAATGGGTTATAGCACAGATCACGACATAGAATCAGGGAAATTATATACTCTATTTAGCGCCCCAGATTTCCCTCAGTTTGGTCAGAAGAGTTACTGTAATGAGGGAGCATATGCTACCTTGAAGCATCCGGATTTTGAAACTCCATCCTTCCATACATTTAAAGCTGTAGATAAACCGAAGATAGACATTTGCTATTTTGGTTGTGAAGGACATGACTTAGATTTAGATTTGACATTAATGGCTCTAGCTGACGCTGTCTCTTCTAACAACTCTAGTCCTATTGAGATTCATTCAGGGGTTGATTTTGAGGCATTAGGCATATTAAACCCACCTTCTTGGAGCATTACATTGACAGATGATGCTACAGGTACCCAAAATGTTCCGATTCCAAAGGCTCCCGTGGTAGAAGGGCTGCCTCTGCCGCCTAGCATAGAGGAACCTCACAAGGCTGCTTATGAATACTTCTTGGAGCTCATTGCAGGATTGAAATTTATGCTCCAAACAACAGAAAATAAGAACAAGATTCATATTTCTCATCGAAAGAGGAAGAAATGCAATTAG 2232 40.77 MDFADELTAGATASNSNPHKPSDTRDSGELSSSDNDTEDVHPVFSNMPASFAPPMSPILPLQSKCNVAIQADMDDKLETIQNICQKIVDTTNLYSFSKLDDQQVYSLMRLREISHRIVNERDSRVTRNDVISAMCFYINRLAGKCKDIVDIMNKMSYKDLDDQQMQQLSRLKELLCGIVDGAKDVETEPSRIVEQGMVSDIWMTESLEVEPIDSCNDDIPLGETQIVAIEDKQAVAEARLANQYCDMSHVKHSISWPPNGSLTLEWVVEMMKTLELSSRNYTPSEFQLIMPVSVVDSILNVAASILHKEPNCLEIDCHGEVSNVVIVGDIHGHYHDLLHLFELANFPSESQYYVFNGNYVDRGAWGLEVFLVLLAWKILMPDRVYLLRGNHETRFCTSSYGFEKEVRTKYGEQGEKVYHRCLETFKELPLAAIIAGKVYTTHGGLFRKPCNPDVQNDKETRTRKLEIGSLQDLSKLERFFVDIPTKDEDPNIILADVLWSNPSKVDGLRENQARGVGLLWGPDFTEAFLKLSNLKLIIRSHEGPDSRDGKIDFDDMIMGYSTDHDIESGKLYTLFSAPDFPQFGQKSYCNEGAYATLKHPDFETPSFHTFKAVDKPKIDICYFGCEGHDLDLDLTLMALADAVSSNNSSPIEIHSGVDFEALGILNPPSWSITLTDDATGTQNVPIPKAPVVEGLPLPPSIEEPHKAAYEYFLELIAGLKFMLQTTENKNKIHISHRKRKKCN 743
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4983177 4991952 + MELO3C021657.2.1 Cme09g00518 337378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g00518 743 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 76 729 - -
Cme09g00518 743 MobiDBLite consensus disorder prediction 1 46 - -
Cme09g00518 743 ProSitePatterns Serine/threonine specific protein phosphatases signature. 387 392 IPR006186 GO:0016787
Cme09g00518 743 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 76 729 - -
Cme09g00518 743 Pfam Calcineurin-like phosphoesterase 323 544 IPR004843 GO:0016787
Cme09g00518 743 MobiDBLite consensus disorder prediction 22 36 - -
Cme09g00518 743 PRINTS Serine/threonine phosphatase family signature 323 350 IPR006186 GO:0016787
Cme09g00518 743 PRINTS Serine/threonine phosphatase family signature 353 380 IPR006186 GO:0016787
Cme09g00518 743 PRINTS Serine/threonine phosphatase family signature 386 410 IPR006186 GO:0016787
Cme09g00518 743 PRINTS Serine/threonine phosphatase family signature 423 449 IPR006186 GO:0016787
Cme09g00518 743 PRINTS Serine/threonine phosphatase family signature 476 503 IPR006186 GO:0016787
Cme09g00518 743 PRINTS Serine/threonine phosphatase family signature 570 586 IPR006186 GO:0016787
Cme09g00518 743 Gene3D - 225 626 IPR029052 -
Cme09g00518 743 SMART pp2a_7 290 614 IPR006186 GO:0016787
Cme09g00518 743 SUPERFAMILY Metallo-dependent phosphatases 279 618 IPR029052 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g02320 Cme-Chr6:30619231 Cme09g00518 Cme-Chr9:4983177 1.52E-140 dispersed
Cme09g00518 Cme-Chr9:4983177 Cme11g01538 Cme-Chr11:22852841 1.13E-49 dispersed
Cme09g00544 Cme-Chr9:5486352 Cme09g00518 Cme-Chr9:4983177 1.77E-13 dispersed
Cme09g00518 Cme-Chr9:4983177 Cme05g00304 Cme-Chr5:2265394 2.26E-51 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g00518 K04460 - csv:101211172 1446.41