Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g00551 ATGTCTATTATTTCTAAGGCTGCTTTAAACCAAGGAATGAACCAACTTGTTACCATTGTTTATCGTTATTCTATTGGTGCAATTGTTGTTGCTCCTTTTGCTTTTGTTTTGGATAGGAAAATAAGACCAAAGATGACTCTCCCCATCTTCGCCAAGATTCTTCTCCTCGGCTTACTCGAACCAGTAATAGCCCAAAGCTTGATTTACTCTGGCACTAAGTACACAACAGCAACTTTTGCAACTGCCATGTGCAATATTCTTCCTGCCTTTGCATTTCTGATGGCTTGGATTTGTAGAATGGAGAAGGTGAATATTAGAAGCTTAAGAAGCCAAGCAAAGATTTTAGGGACTTTAGTAACAGTTGGAGGAGCTATGATGATGACACTTTTAAAAGGACCTTTATTGAGTTTGCCTTGGACCAACCAAAATAATTTCAATCCTCATTCTTATTCTACTCTTCCAAATAAACAACAACCTGTTAAAGCTGCCATTGTTATCACAATTTCAAGTATTTGCTCCTCAGCTTTCACCATTCTTCTGGCACATACAATAAGAACATATCCAGCTGAGCTCACATTAACAACATTCATATGCTTGGCTGGAGCTGTTGAAAGTACTATTTTAGCCTTAGCATTTGAATGGGACAATCCATCTGCATGGGCTTTACATGCAGATTCCATACTCTTGGCTGCTCTCTATGGTGGCATAATATCATCTGGAATTGCTTATTATCTTCAAGGAGTGGTGGTGAAGTTAAAAGGGCCTGTATTTGTAACAGCATTCAATCCTCTTAGTATGGTTATAGTTGCTGTAATTAGTTCATTCATATTCGCTGAGACATTGCGCTTAGGAAGGGTTGTTGGTGCAGCTGTGATAATTATAGGCCTTTACTTGGTATTGTGGGGCAAAAGCAAAGATAAATTTCAACTCAAAAATGGAAAAAATAATGAAAACAATGAAGAATTGCCAACTTCAATCCAAAACTCAACAACCACAAATCAGCAGTTGAAGCCTTTAGATTCAACAATAAGCCATTAA 1038 37.67 MSIISKAALNQGMNQLVTIVYRYSIGAIVVAPFAFVLDRKIRPKMTLPIFAKILLLGLLEPVIAQSLIYSGTKYTTATFATAMCNILPAFAFLMAWICRMEKVNIRSLRSQAKILGTLVTVGGAMMMTLLKGPLLSLPWTNQNNFNPHSYSTLPNKQQPVKAAIVITISSICSSAFTILLAHTIRTYPAELTLTTFICLAGAVESTILALAFEWDNPSAWALHADSILLAALYGGIISSGIAYYLQGVVVKLKGPVFVTAFNPLSMVIVAVISSFIFAETLRLGRVVGAAVIIIGLYLVLWGKSKDKFQLKNGKNNENNEELPTSIQNSTTTNQQLKPLDSTISH 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5602356 5606758 + MELO3C025456.2.1 Cme09g00551 337411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g00551 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 21 130 - -
Cme09g00551 345 PANTHER WAT1-RELATED PROTEIN 1 315 - -
Cme09g00551 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 229 305 - -
Cme09g00551 345 PANTHER WAT1-RELATED PROTEIN 1 315 IPR030184 GO:0016021|GO:0022857
Cme09g00551 345 MobiDBLite consensus disorder prediction 315 345 - -
Cme09g00551 345 Pfam EamA-like transporter family 162 300 IPR000620 GO:0016020|GO:0016021
Cme09g00551 345 Pfam EamA-like transporter family 3 127 IPR000620 GO:0016020|GO:0016021
Cme09g00551 345 MobiDBLite consensus disorder prediction 312 345 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme09g00551 Cme-Chr9:5602356 Cme09g00562 Cme-Chr9:5792882 1.56E-132 dispersed
Cme09g00551 Cme-Chr9:5602356 Cme09g00554 Cme-Chr9:5679198 1.83E-101 proximal
Cme10g00877 Cme-Chr10:6138411 Cme09g00551 Cme-Chr9:5602356 1.46E-134 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g00551 - - csv:101208640 632.098