Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g00564 ATGCAGGTAACACCAGCATTTGGTCTATCATCAGGAGTTTCTGTATGGAATGGATTTATACTTGAGGCAGTGATGACATTTGGATTAGTATATACAGTATATGCAACAGCAATAGATCCAAAGAGGGAGAATTTAGGTATCATTGCCCCGATTTCAATTGGTTTCATTGTTGGTGCTAACATTTTAGTTGGTGGTGCTTTTGATGGTGCTTCCATGAACCCTGCTGTCACCTTTGGCCCTGCTGTTGTCACTTGGTCATGGACCCATCACTGGGTCTACTGGCTAGGTCCTATGACTGGTGCAACCATTGCTGCCGTTGTTTATGATACACTCTTTATCTCTGACTCCATGCATGATCCTCTTACTCACACCACAAGTTGTATTGCAGGCTCCAGTTGGTCGACCACAAAGTTTCAGAATAATTTTGTTCGAGATCAGACAAGACAACTCAATGTTGCAGACATGGATCAGAGATGCACTCAACAGACATGGATCAAAATCACTAATCTTAAAATTGTTACATCCAGGGCCTTGTCTGAAGTCAAGCATTGCATCCTGCAAGTTAAAATGACTCTCAAGACGAATCCGTGGAAGTTGTCCTCGATACCGAAAGGATCGAAGCTTCGAACACTTGATATGGAGAAACCTCAAATCTGGACATTCCAAAACAGTCAGCCTTTGAAGCTTCGGAGTTGA 696 42.82 MQVTPAFGLSSGVSVWNGFILEAVMTFGLVYTVYATAIDPKRENLGIIAPISIGFIVGANILVGGAFDGASMNPAVTFGPAVVTWSWTHHWVYWLGPMTGATIAAVVYDTLFISDSMHDPLTHTTSCIAGSSWSTTKFQNNFVRDQTRQLNVADMDQRCTQQTWIKITNLKIVTSRALSEVKHCILQVKMTLKTNPWKLSSIPKGSKLRTLDMEKPQIWTFQNSQPLKLRS 231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5803978 5808244 - MELO3C033751.2.1 Cme09g00564 337424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g00564 231 PANTHER MAJOR INTRINSIC PROTEIN-RELATED 3 124 - -
Cme09g00564 231 Gene3D Glycerol uptake facilitator protein. 2 126 IPR023271 -
Cme09g00564 231 PANTHER AQUAPORIN-8 3 124 IPR034294 -
Cme09g00564 231 Pfam Major intrinsic protein 9 108 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme09g00564 231 PRINTS Major intrinsic protein family signature 54 76 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme09g00564 231 PRINTS Major intrinsic protein family signature 91 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme09g00564 231 PRINTS Major intrinsic protein family signature 21 39 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme09g00564 231 SUPERFAMILY Aquaporin-like 4 114 IPR023271 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme09g00564 Cme-Chr9:5803978 Cme12g01777 Cme-Chr12:24357524 2.41E-46 dispersed
Cme09g00564 Cme-Chr9:5803978 Cme08g01268 Cme-Chr8:9177803 5.82E-52 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g00564 K09873 - csv:101222909 242.662