Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g00565 ATGCCAATCCATAAGTTTACATTCGGATCACCGGGAGAGGCGAGCCAACCGGACGCGATAAAGGCATCATTCGCCGAATTCTTCTCCATGATCATCTTTATTTTCGCCGGACAAGGATCCGGATTAGCTTTTGATAAATTAACGGACGGTGGATCTACGACAGCGTCGGGGCTGATAATGGCATCTCTGGCTCATGCTTTTGCGTTATTTGTGGCGGTTTCGGTGGGAGCGAATATCTCCGGCGGGCATGTGAATCCGGCAGTTACATTTGGTGCCCTTGTTGGTGGAAACATATCGTTTTTTAGAAGTATAATGTATTGGATTGCTCAATTGCTTGGCTCTGTTGTTGCGTGCTTCCTTCTTAAGTTTGCCACCGGTGGAAAGGTATGA 390 47.44 MPIHKFTFGSPGEASQPDAIKASFAEFFSMIIFIFAGQGSGLAFDKLTDGGSTTASGLIMASLAHAFALFVAVSVGANISGGHVNPAVTFGALVGGNISFFRSIMYWIAQLLGSVVACFLLKFATGGKV 129
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5810542 5811221 - MELO3C025466.2.1 Cme09g00565 337425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g00565 129 Pfam Major intrinsic protein 14 127 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme09g00565 129 PANTHER AQUAPORIN-8 1 128 IPR034294 -
Cme09g00565 129 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Cme09g00565 129 Gene3D Glycerol uptake facilitator protein. 5 129 IPR023271 -
Cme09g00565 129 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme09g00565 129 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme09g00565 129 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme09g00565 129 PANTHER AQUAPORIN TIP1-1 1 128 - -
Cme09g00565 129 SUPERFAMILY Aquaporin-like 16 127 IPR023271 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme09g00565 Cme-Chr9:5810542 Cme12g01777 Cme-Chr12:24357524 1.52E-41 dispersed
Cme09g00565 Cme-Chr9:5810542 Cme08g01268 Cme-Chr8:9177803 7.81E-61 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g00565 K09873 - csv:101222909 239.965