Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g00573 ATGGAGATAACATACTCATCACCTAGCGCCACCAGTCTTTCTTTCTCTAATTCCTCCATGCCTACCTCCGGCCGACCTGTTAAGGTCATTCCATTGCAGCATCCTACTACGACGTCGTCTTCTGCGGCTGGTGGCTTCGGCGCCGGTAATCTGGTGAAGTCATGGACGACGAAGGTTAAGCGGATGACTTGGGTTCACTGGATGGAGCTTCTCTTACCTTGTTCTCGTTGGATTAGAACTTACAAATGGCGGGAGTATTTACAGAGCGATCTCTTGTCTGGGATTACTATTGGTATCATGCTCGTTCCGCAGTCAGATTCAGGTTTTCTCCCTCTGTTTGTGTATGCAATATTTGGTTCTTCTCGTCAGCTTGCCGTTGGTCCAGTAGCATTGGTTTCTCTACTGGTTTCCAATGTCTTGGGTGGAATTGTCAATTCATCTGAGGAATTATATACTGAACTCGCTATATTATTGGCACTCATGGTTGGAATACTGGAATGCACAATGGGTCTCTTGAGACTTGGATGGCTCATTCGCTTTATCAGCCACTCTGTAATCTCTGGATTTACTACAGCTTCTGCCTTTGTGATTGGATTATCCCAAGTGAAATACTTTCTGGGGTATGATGTATCAAGAAGTAGCAAAATCGTCCCTCTTATTGAGAGCATAATAGCTGGAGCAGACGGGGGAAAAACAAGGAAGCACTTACGGTTTCTCAGAGTTGCTGGTCCCCTTACAGCAGTTGTTATGGGCACAACTTTAACGAAAATATTAAATCTACCTTCCATTTCTTTGGTTGGAGACATTCCCCAAGGCCTTCCAACGTTTTCAATTCCTAAAAGATTTGAGCATGTGAAGTCGCTGATTCCAACTGCCTTTCTAATTACTGGAGTGGCTATATTGGAATCTGTTGGGATTGCGAAAGCATTAGCAGCCAAGAATGGGTATGAGTTAGACTCAAATCAGGAGTTATTTGGCCTTGGAGTAGCCAATGTTGTTGGCTCTTTTTTTTCTGCATATCCTACAACAGGTTCTTTTTCAAGATCAGCTGTGAACCATGAAAGTGGAGCAAAAACTAGCTTATCTCAGATTGTTACAGGAATCGTTATGGGTGGTGCCCTTCTTTTCTTGACTCCGCTGTTTGAGCACATACCTCAGTGTGCTTTGGCTGCGATTGTCATCTCTGCTGTAATAACTTTGGTGGATTACGAGGAAGCTATTTTTTTGTGGCGTATAGATAAGAAGGATTTTCTTCTTTGGGTGATAACTGCCATTGCTACTTTGTTCCTGGGTATTGAGATTGGTGTCTTAATTGGGGTGGGTGTTTCACTGGCCTTTGTCATTCACGAATCTGCAAATCCACATATGGCTGTATTGGGGCGTCTTCCCGGCACCACTGTGTATAGAAATGTTCAACAGTATCCTGAAGCATATACCTATAATGGGATTGTGGTTGTTCGAATTGATGCACCAATTTATTTTGCAAACACAAGTTACATCAAAGACAGGTTACGTGAATATGAAGTAGAAGTGGATCAATCTACTGGTCGTGGACCGGACGTTGAAAGAGTCTATTTCGTGATTATAGAGATGGCACCTGTTACCTACATAGATTCAAGTGCTGTCCAAGCTCTAAAAGATTTGTATCAAGAGTACAAACTCCGTGATATTCAGGTTGCCATTTCCAATCCGAATCGAGATGTTCTGCTTACATTTTCAAGATCGGGCGTCGTCGAGCTTATTGGCAAGGAATGGTTTTTTGTGAGAGTTCATGATGCAGTTCAAGTTTGTCTTCAACATGTAGAGAGCTTAAATGAAACAACCAAAACATCAGATTCATCTCCTAAAGATAAATCAAGCTTTCTCCAAAGTTTAGTGAAGTCGAGAAGTGAGGATTTATCAGTGAGTCAATTAGAGTCGGGCTTCCAAAAGCTTCCAAGTTTCAATGAAACTGACCCTCAATTAGAACCTTTACTATCTCGAAAGCCTTGA 1992 42.47 MEITYSSPSATSLSFSNSSMPTSGRPVKVIPLQHPTTTSSSAAGGFGAGNLVKSWTTKVKRMTWVHWMELLLPCSRWIRTYKWREYLQSDLLSGITIGIMLVPQSDSGFLPLFVYAIFGSSRQLAVGPVALVSLLVSNVLGGIVNSSEELYTELAILLALMVGILECTMGLLRLGWLIRFISHSVISGFTTASAFVIGLSQVKYFLGYDVSRSSKIVPLIESIIAGADGGKTRKHLRFLRVAGPLTAVVMGTTLTKILNLPSISLVGDIPQGLPTFSIPKRFEHVKSLIPTAFLITGVAILESVGIAKALAAKNGYELDSNQELFGLGVANVVGSFFSAYPTTGSFSRSAVNHESGAKTSLSQIVTGIVMGGALLFLTPLFEHIPQCALAAIVISAVITLVDYEEAIFLWRIDKKDFLLWVITAIATLFLGIEIGVLIGVGVSLAFVIHESANPHMAVLGRLPGTTVYRNVQQYPEAYTYNGIVVVRIDAPIYFANTSYIKDRLREYEVEVDQSTGRGPDVERVYFVIIEMAPVTYIDSSAVQALKDLYQEYKLRDIQVAISNPNRDVLLTFSRSGVVELIGKEWFFVRVHDAVQVCLQHVESLNETTKTSDSSPKDKSSFLQSLVKSRSEDLSVSQLESGFQKLPSFNETDPQLEPLLSRKP 663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5889574 5902333 - MELO3C025473.2.1 Cme09g00573 337433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g00573 663 MobiDBLite consensus disorder prediction 644 663 - -
Cme09g00573 663 SUPERFAMILY SpoIIaa-like 475 597 IPR036513 -
Cme09g00573 663 Pfam Sulfate permease family 87 226 IPR011547 GO:0016021
Cme09g00573 663 Pfam Sulfate permease family 233 423 IPR011547 GO:0016021
Cme09g00573 663 Pfam STAS domain 474 593 IPR002645 -
Cme09g00573 663 PANTHER SULFATE TRANSPORTER 4.1-RELATED 230 631 - -
Cme09g00573 663 PANTHER SULFATE TRANSPORTER 4.1-RELATED 44 228 - -
Cme09g00573 663 CDD STAS_SulP_like_sulfate_transporter 474 590 - -
Cme09g00573 663 MobiDBLite consensus disorder prediction 1 24 - -
Cme09g00573 663 PANTHER SULFATE TRANSPORTER 44 228 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cme09g00573 663 ProSiteProfiles STAS domain profile. 473 597 IPR002645 -
Cme09g00573 663 MobiDBLite consensus disorder prediction 1 27 - -
Cme09g00573 663 Gene3D STAS domain 453 601 IPR036513 -
Cme09g00573 663 PANTHER SULFATE TRANSPORTER 230 631 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme09g00573 Cme-Chr9:5889574 Cme09g00879 Cme-Chr9:11871499 2.66E-116 dispersed
Cme09g00573 Cme-Chr9:5889574 Cme01g02672 Cme-Chr1:34201307 1.06E-96 transposed
Cme09g00573 Cme-Chr9:5889574 Cme06g00580 Cme-Chr6:3732248 1.36E-96 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g00573 K18059 - csv:101202870 1202.96