Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme09g00618 | ATGGGTAAGGAAAAGACTCACATCAACATTGTAGTCATTGGCCATGTCGACTCTGGTAAGTCGACCACTACTGGCCATTTGATTTACAAGCTTGGAGGTATTGACAAGCGTGTTATTGAGAGGTTTGAGAAGGAAGCTGCTGAGATGAACAAGAGATCGTTCAAGTATGCCTGGGTGTTGGATAAGCTTAAGGCTGAACGTGAGCGTGGTATCACAATTGATATTGCTTTGTGGAAGTTCGAAACCACCAAGTACTACTGCACTGTTATTGATGCTCCTGGGCATCGTGATTTCATCAAGAACATGATTACTGGAACTTCCCAGGAAGCTCTCCAAGAAGCTCTCCCTGGTGACAACGTGGGGTTCAACGTGAAGAATGTTGCCGTGAAGGATCTCAAGCGTGGTTATGTTGCCTCAAATTCCAAGGATGATCCTGCCAAGGAAGCTGCCAATTTCACTTCCCAAGTTATCATCATGAACCATCCAGGACAGATTGGAAATGGTTATGCACCTGTCCTCGATTGCCACACATCTCACATTGCTGTCAAATTTGCCGAGATTTTAACCAAGATTGACAGGCGATCTGGAAAAGAACTGGAGAAAGAGCCCAAGTTTTTGAAGAACGGAGATGCTGGATTTGTTAAGATGATTCCCACCAAACCCATGGTGGTGGAAACATTCTCCGAGTATCCGCCACTTGGACGATTTGCCGTGAGGGACATGCGTCAAACTGTGGCTGTTGGTGTCATCAAGGCCGTCGAGAAGAAGGATGCATCCGGTGCCAAGGTCACCAAATCAGCAGCTAAGAAATCAGGCAAGTGA | 822 | 46.35 | MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASGAKVTKSAAKKSGK | 273 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 6539075 | 6546190 | + | MELO3C025511.2.1 | Cme09g00618 | 337478 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme09g00618 | 273 | PANTHER | ELONGATION FACTOR 1-ALPHA 1 | 109 | 271 | - | - | |
Cme09g00618 | 273 | Pfam | Elongation factor Tu C-terminal domain | 145 | 253 | IPR004160 | - | |
Cme09g00618 | 273 | SUPERFAMILY | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 150 | 253 | IPR009001 | - | |
Cme09g00618 | 273 | Gene3D | - | 1 | 112 | IPR027417 | - | |
Cme09g00618 | 273 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 5 | 108 | IPR000795 | GO:0003924|GO:0005525 | |
Cme09g00618 | 273 | PANTHER | TRANSLATION FACTOR | 109 | 271 | - | - | |
Cme09g00618 | 273 | PANTHER | TRANSLATION FACTOR | 1 | 108 | - | - | |
Cme09g00618 | 273 | PRINTS | GTP-binding elongation factor signature | 9 | 22 | IPR000795 | GO:0003924|GO:0005525 | |
Cme09g00618 | 273 | PRINTS | GTP-binding elongation factor signature | 88 | 98 | IPR000795 | GO:0003924|GO:0005525 | |
Cme09g00618 | 273 | PRINTS | GTP-binding elongation factor signature | 68 | 76 | IPR000795 | GO:0003924|GO:0005525 | |
Cme09g00618 | 273 | PANTHER | ELONGATION FACTOR 1-ALPHA 1 | 1 | 108 | - | - | |
Cme09g00618 | 273 | Pfam | Elongation factor Tu GTP binding domain | 5 | 108 | IPR000795 | GO:0003924|GO:0005525 | |
Cme09g00618 | 273 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 61 | 76 | IPR031157 | - | |
Cme09g00618 | 273 | Gene3D | Translation factors | 147 | 254 | - | - | |
Cme09g00618 | 273 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 3 | 108 | IPR027417 | - | |
Cme09g00618 | 273 | SUPERFAMILY | Translation proteins | 102 | 145 | IPR009000 | - | |
Cme09g00618 | 273 | CDD | EF1_alpha_III | 147 | 250 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme09g00618 | Cme-Chr9:6539075 | Cme09g00630 | Cme-Chr9:6715988 | 3.50E-73 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme09g00618 | K03231 | - | csv:101220517 | 325.479 |