Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g00630 ATGGGTAAGGAAAAGACTCACATCAACATTGTGGTCATTGGCCATGTCGACTCTGGCAAGTCGACCACTACTGGCCATTTGATTTACAAGCTTGGAGGTATTGACAAGCGTGTTATTGAGAGGTTCGAGAAAGAAGCTGCTGAGATGAACAAGAGATCGTTCAAGTATGCCTGGGTGTTGGATAAGCTTAAGGCTGAACGTGAGCGTGGTATCACAATTGATATTGCTTTGTGGAAATTCGAAACCACCAAGTACTACTGCACTGTTATTGATGCTCCTGGGCATCGTGATTTCATCAAGAACATGATTACTGGAACTTCTCAGGCTGATTGTGCTGTCCTTATCATTGACTCCACTACCGGAGGTTTTGAAGCTGGTATTTCTAAGGATGGGCAGACCCGTGAACACGCCCTCCTTGCCTTTACCCTCGGTGTCAAGCAAATGATTTGCTGCTGTAACAAGATGGATGCCACCACTCCCAAGTACTCCAAATCTAGGTACGATGAAATTGTGAAGGAAGTTTCTTCCTACCTCAAGAAGGTTGGCTACAACCCAGACAAAATTCCCTTTGTTCCCATCTCTGGCTTTGAGGGTGACAACATGATTGAAAGATCCACCAACCTCGATTGGTACAAGGGACCAACCCTTCTTGAGGCCCTTGACCTGATCCAAGAGCCCAAGAGACCGTCTGACAAACCCCTTCGTCTCCCACTTCAGGATTCTGTGGAGATGCACCACGAAGCTCTCCAAGAAGCTCTCCCTGGTGACAACGTTGGGTTCAACGTGAAAAATGTTGCTGTGAAGGATCTCAAGCGTGGGTATGTTGCTTCAAATTCCAAGGATGATCCTGCCAAGGAAGCTGCAAATTTCACTTCCCAAGTTATCATCATGAACCATCCAGGACAGATTGGAAATGGTTATGCCCCTGTTCTGGACTGCCACACCTCTCACATTGCAGTCAAATTTGCTGAGATCTTAACCAAGATTGACAGGCGATCTGGTAAAGAACTCGAGAAAGAGCCCAAGTTTCTGAAAAATGGAGATGCTGGATTTGTTAAGATGATCCCCACCAAGCCCATGGTGGTGGAAACATTCTCTGAATATCCCCCACTTGGACGATTTGCCGTGAGGGACATGCGTCAAACCGTGGCTGTTGGTGTCATCAAGGCCGTTGAGAAGAAGGACGCATCCGGCGCCAAGGTCACCAAGTCTGCAGCAAAGAAATCAGGGAAGTGA 1236 47.25 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLIQEPKRPSDKPLRLPLQDSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASGAKVTKSAAKKSGK 411
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6715988 6718032 + MELO3C002878.2.1 Cme09g00630 337490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g00630 411 CDD EF1_alpha_III 285 388 - -
Cme09g00630 411 PANTHER TRANSLATION FACTOR 1 240 - -
Cme09g00630 411 PANTHER TRANSLATION FACTOR 241 409 - -
Cme09g00630 411 SUPERFAMILY Translation proteins 226 281 IPR009000 -
Cme09g00630 411 Gene3D Translation factors 239 285 - -
Cme09g00630 411 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 5 230 IPR000795 GO:0003924|GO:0005525
Cme09g00630 411 Gene3D Translation factors 286 392 - -
Cme09g00630 411 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 61 76 IPR031157 -
Cme09g00630 411 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 288 391 IPR009001 -
Cme09g00630 411 Gene3D - 1 226 IPR027417 -
Cme09g00630 411 Pfam Elongation factor Tu C-terminal domain 283 391 IPR004160 -
Cme09g00630 411 PANTHER ELONGATION FACTOR 1-ALPHA-LIKE 1 240 - -
Cme09g00630 411 PANTHER ELONGATION FACTOR 1-ALPHA-LIKE 241 409 - -
Cme09g00630 411 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 242 IPR027417 -
Cme09g00630 411 CDD EF1_alpha 9 227 - -
Cme09g00630 411 Pfam Elongation factor Tu GTP binding domain 5 221 IPR000795 GO:0003924|GO:0005525
Cme09g00630 411 PRINTS GTP-binding elongation factor signature 88 98 IPR000795 GO:0003924|GO:0005525
Cme09g00630 411 PRINTS GTP-binding elongation factor signature 148 157 IPR000795 GO:0003924|GO:0005525
Cme09g00630 411 PRINTS GTP-binding elongation factor signature 9 22 IPR000795 GO:0003924|GO:0005525
Cme09g00630 411 PRINTS GTP-binding elongation factor signature 68 76 IPR000795 GO:0003924|GO:0005525
Cme09g00630 411 PRINTS GTP-binding elongation factor signature 104 115 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme09g00618 Cme-Chr9:6539075 Cme09g00630 Cme-Chr9:6715988 3.50E-73 dispersed
Cme09g00630 Cme-Chr9:6715988 Cme11g01780 Cme-Chr11:25980607 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g00630 K03231 - csv:101220517 805.053