Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme09g00630 | ATGGGTAAGGAAAAGACTCACATCAACATTGTGGTCATTGGCCATGTCGACTCTGGCAAGTCGACCACTACTGGCCATTTGATTTACAAGCTTGGAGGTATTGACAAGCGTGTTATTGAGAGGTTCGAGAAAGAAGCTGCTGAGATGAACAAGAGATCGTTCAAGTATGCCTGGGTGTTGGATAAGCTTAAGGCTGAACGTGAGCGTGGTATCACAATTGATATTGCTTTGTGGAAATTCGAAACCACCAAGTACTACTGCACTGTTATTGATGCTCCTGGGCATCGTGATTTCATCAAGAACATGATTACTGGAACTTCTCAGGCTGATTGTGCTGTCCTTATCATTGACTCCACTACCGGAGGTTTTGAAGCTGGTATTTCTAAGGATGGGCAGACCCGTGAACACGCCCTCCTTGCCTTTACCCTCGGTGTCAAGCAAATGATTTGCTGCTGTAACAAGATGGATGCCACCACTCCCAAGTACTCCAAATCTAGGTACGATGAAATTGTGAAGGAAGTTTCTTCCTACCTCAAGAAGGTTGGCTACAACCCAGACAAAATTCCCTTTGTTCCCATCTCTGGCTTTGAGGGTGACAACATGATTGAAAGATCCACCAACCTCGATTGGTACAAGGGACCAACCCTTCTTGAGGCCCTTGACCTGATCCAAGAGCCCAAGAGACCGTCTGACAAACCCCTTCGTCTCCCACTTCAGGATTCTGTGGAGATGCACCACGAAGCTCTCCAAGAAGCTCTCCCTGGTGACAACGTTGGGTTCAACGTGAAAAATGTTGCTGTGAAGGATCTCAAGCGTGGGTATGTTGCTTCAAATTCCAAGGATGATCCTGCCAAGGAAGCTGCAAATTTCACTTCCCAAGTTATCATCATGAACCATCCAGGACAGATTGGAAATGGTTATGCCCCTGTTCTGGACTGCCACACCTCTCACATTGCAGTCAAATTTGCTGAGATCTTAACCAAGATTGACAGGCGATCTGGTAAAGAACTCGAGAAAGAGCCCAAGTTTCTGAAAAATGGAGATGCTGGATTTGTTAAGATGATCCCCACCAAGCCCATGGTGGTGGAAACATTCTCTGAATATCCCCCACTTGGACGATTTGCCGTGAGGGACATGCGTCAAACCGTGGCTGTTGGTGTCATCAAGGCCGTTGAGAAGAAGGACGCATCCGGCGCCAAGGTCACCAAGTCTGCAGCAAAGAAATCAGGGAAGTGA | 1236 | 47.25 | MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLIQEPKRPSDKPLRLPLQDSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASGAKVTKSAAKKSGK | 411 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 6715988 | 6718032 | + | MELO3C002878.2.1 | Cme09g00630 | 337490 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme09g00630 | 411 | CDD | EF1_alpha_III | 285 | 388 | - | - | |
Cme09g00630 | 411 | PANTHER | TRANSLATION FACTOR | 1 | 240 | - | - | |
Cme09g00630 | 411 | PANTHER | TRANSLATION FACTOR | 241 | 409 | - | - | |
Cme09g00630 | 411 | SUPERFAMILY | Translation proteins | 226 | 281 | IPR009000 | - | |
Cme09g00630 | 411 | Gene3D | Translation factors | 239 | 285 | - | - | |
Cme09g00630 | 411 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 5 | 230 | IPR000795 | GO:0003924|GO:0005525 | |
Cme09g00630 | 411 | Gene3D | Translation factors | 286 | 392 | - | - | |
Cme09g00630 | 411 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 61 | 76 | IPR031157 | - | |
Cme09g00630 | 411 | SUPERFAMILY | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 288 | 391 | IPR009001 | - | |
Cme09g00630 | 411 | Gene3D | - | 1 | 226 | IPR027417 | - | |
Cme09g00630 | 411 | Pfam | Elongation factor Tu C-terminal domain | 283 | 391 | IPR004160 | - | |
Cme09g00630 | 411 | PANTHER | ELONGATION FACTOR 1-ALPHA-LIKE | 1 | 240 | - | - | |
Cme09g00630 | 411 | PANTHER | ELONGATION FACTOR 1-ALPHA-LIKE | 241 | 409 | - | - | |
Cme09g00630 | 411 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 3 | 242 | IPR027417 | - | |
Cme09g00630 | 411 | CDD | EF1_alpha | 9 | 227 | - | - | |
Cme09g00630 | 411 | Pfam | Elongation factor Tu GTP binding domain | 5 | 221 | IPR000795 | GO:0003924|GO:0005525 | |
Cme09g00630 | 411 | PRINTS | GTP-binding elongation factor signature | 88 | 98 | IPR000795 | GO:0003924|GO:0005525 | |
Cme09g00630 | 411 | PRINTS | GTP-binding elongation factor signature | 148 | 157 | IPR000795 | GO:0003924|GO:0005525 | |
Cme09g00630 | 411 | PRINTS | GTP-binding elongation factor signature | 9 | 22 | IPR000795 | GO:0003924|GO:0005525 | |
Cme09g00630 | 411 | PRINTS | GTP-binding elongation factor signature | 68 | 76 | IPR000795 | GO:0003924|GO:0005525 | |
Cme09g00630 | 411 | PRINTS | GTP-binding elongation factor signature | 104 | 115 | IPR000795 | GO:0003924|GO:0005525 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme09g00618 | Cme-Chr9:6539075 | Cme09g00630 | Cme-Chr9:6715988 | 3.50E-73 | dispersed | |
Cme09g00630 | Cme-Chr9:6715988 | Cme11g01780 | Cme-Chr11:25980607 | 0 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme09g00630 | K03231 | - | csv:101220517 | 805.053 |