Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g00662 ATGTCCTCATCGCTCTGTTTCTCAATTCCGGCATTGACGCCGCACTACTGGCGGTCGAAGAACTTCGGATTCTTCCTTTTACTTCAATCAAACCGATGTATTTGCTTCGCACCTCGCTTCGTTGCTTGCTTGAAAAACGACGACTCTGTTGCAATACCCAAACCTGCTCCGCTGGCTTTCGATCCCGCCGAGGAGCTGTACGGACTTGACGTCGATTTAAAACCCAGGAATTCAGCTTCTAGCGCACCTGAACCCAGGTCCTGGTTTGGCCCAAATGGTCAGTATATTAAAGAATTACCATGTCCAAGTTGCCGAGGTAGGGGTTATGCGCCTTGTACGGAATGTGGAATTGAAAGATCCCGTGCTGACTGTTCTGTGTGTAATGGAAAGGGTATAGTGACCTGCCACCAATGTTTGGGGGATCGTGTCATATGGGAAGAGTCCATTGATGAAAGACCGTGGGAGAAAGCACGATCCACTTCTCCTTTAAGAATGAAGGAGGATGATGAAGTTGATAACTTGGAAATAAAGCTGGAAGAAAAGAAGAAATCGAAGCGTGTTTACCAATCACCTCCTCCTGAAGTTGGTTTAAAGATCAGTCGATCATTAAAAAGTCTCAATGCCAAAACAGGTATATTTAGTAAGAGAATGAGGATTATCCATCGTGACCCTGCTCTTCATGCTCAGAGAGTGGCTGCAATTAAGAAAGCCAAAGGAAGTGCTGAAGCAAGAAAACGTACTTCTGAGGCTTTGAAAGCATTCTTTAGTGACCCAGAAAACCGTAGAAAGCGGAGCAGTGCAATGAAAGGAGTAAAATTTTACTGTAAAAACTGTGGCCGTGAAGGGCATCGAAGACACTATTGCCCCGAACTTAAGGAAGATTCCATTGATAGGCGATTCAGATGTCGAGTATGTGGAGAGAAGGGCCATAACAGGAGGACTTGTGAGAAGTCTGTGTTGAATGTTACACCAATGATCCCAACAATTCAGCGCCATTGTGGGATATGTGGTTTGAAGGGCCACAACAGGAGGAACTGTCAGAAGTCTGATGTACATCGTCAGAGCCATCAAAACATGTTGAGGCCGAACTTGATAAGTGAATATAGGGTGAGCAATGAAAATAGGAGAGTGAGGCAGGATCATTGTAGGATTTGCAAGAAAGGCGGGCACAGTCAATGGAAATGTCCCAGTATTGATAGGGAAGGTAATGGTCTGACTACTAGAAGATTATACACTTGCAAACTTTGTCATGAAAAAGGGCATAATATTAGGACATGCCCAATTAGAAGTATGAACGATCTACAGAAAAATCTTCCCGTTGCTTTAAACCAATAA 1335 44.19 MSSSLCFSIPALTPHYWRSKNFGFFLLLQSNRCICFAPRFVACLKNDDSVAIPKPAPLAFDPAEELYGLDVDLKPRNSASSAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRMRIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPENRRKRSSAMKGVKFYCKNCGREGHRRHYCPELKEDSIDRRFRCRVCGEKGHNRRTCEKSVLNVTPMIPTIQRHCGICGLKGHNRRNCQKSDVHRQSHQNMLRPNLISEYRVSNENRRVRQDHCRICKKGGHSQWKCPSIDREGNGLTTRRLYTCKLCHEKGHNIRTCPIRSMNDLQKNLPVALNQ 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7193593 7207912 + MELO3C002903.2.1 Cme09g00662 337522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g00662 444 ProSiteProfiles Zinc finger CCHC-type profile. 275 290 IPR001878 GO:0003676|GO:0008270
Cme09g00662 444 Coils Coil 164 184 - -
Cme09g00662 444 PANTHER ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN 372 431 - -
Cme09g00662 444 PANTHER ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN 11 356 - -
Cme09g00662 444 Pfam Zinc knuckle 411 427 IPR025829 -
Cme09g00662 444 PANTHER ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN 372 431 - -
Cme09g00662 444 PANTHER ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN 11 356 - -
Cme09g00662 444 SUPERFAMILY Retrovirus zinc finger-like domains 272 318 IPR036875 GO:0003676|GO:0008270
Cme09g00662 444 ProSiteProfiles Zinc finger CCHC-type profile. 301 317 IPR001878 GO:0003676|GO:0008270
Cme09g00662 444 Gene3D - 272 321 - -
Cme09g00662 444 Gene3D - 377 437 - -
Cme09g00662 444 SMART c2hcfinal6 381 397 IPR001878 GO:0003676|GO:0008270
Cme09g00662 444 SMART c2hcfinal6 301 317 IPR001878 GO:0003676|GO:0008270
Cme09g00662 444 SMART c2hcfinal6 332 348 IPR001878 GO:0003676|GO:0008270
Cme09g00662 444 SMART c2hcfinal6 274 290 IPR001878 GO:0003676|GO:0008270
Cme09g00662 444 SMART c2hcfinal6 412 428 IPR001878 GO:0003676|GO:0008270
Cme09g00662 444 SUPERFAMILY Retrovirus zinc finger-like domains 371 430 IPR036875 GO:0003676|GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g00662 - - cmo:103503314 910.983