Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g00680 ATGTACAGGACAGTGGCTACATCTGCGGCCACAACTACCACAACAGATAGCCTGGATTATGTTGTAAATTTGGATCAAATTCCACGTTGGAGTGATGCAGAACATAGGTCTTCATTGGAGTTCGTTAACGAAGATCCTTCCTTCTCTAATTCTTACTTTCCTGATCCTCTCACGTCTCCATCTGACGCCGAAGGTGGGACTAATGGAGTCGTTTCGAGATTTCCCGTAGATCATGAAATTAATTCTAAAATATATCTCTGGAGGGGGAATCCATGGAATCTCGAGGTAGATGCTGTCGTGAATTCTACGAACGAGAACTTGGATGAAGCGCACAGCAGCCCTGGTTTGCATGCTGCTGCAGGACCTGGTCTATTAGACGAATGTGGAACACTTGGTGGTTGCCGCACAGGAATGGCAAAAGTCACTAATGCTTATGACCTTCCAGCAAGAAAGGTCATACATACTGTTGGTCCAAAATATGCTGTCAAATACCATACTGCTGCAGAGAATGCTCTGAGCCATTGCTACCGTTCTTGCCTTGAACTTCTCATTGAAAATGGGCTTCAGAGCATTGCTATGGGTTGTATATATACAGAGGCAAAAAACTATCCCCGTGAACCTGCTGCACACGTAGCAATAAGAACTGTGCGTCGTTTTCTCGAGAAGCAGAGAGATAAAATTAAAGCGGTTGTATTTTGTACAACGTCATCAGTAGATACAGAAATATACAAGAGGTTGCTTCCTCTGTACTTTCCTCGTGATAAACACGAGGAAGAAGTTGCATTGTCAAAGCTTCCTGCAGATGTTGGAGATGAGAATGGTGAGACCATTATAGACGAGCGGAAAATAAGGATAAAACCTTTACCCAAAAAGAATGTTCCAAAGCCTCCCCCAGTTCCCAATGATACTCCTGTTAGTGATGTAAGGTTGACACGGAGGAACTCATCATATTTGGATTCATACTTGGATCCTGCTTTCATGGCTTTAATCAAAGACCCAGATCAAAGACGCAAGGAACAATGGGAAAAAACTGCCCAGGCGCAGACTGGATGGAACTATGGTAGAATGCTTGGATTTGGTGACCTTGGTGGACCTCCTTTATCTGCTGCTGAAGAATATTCACTTCATTCAAGATACCTTGCTAAAGCAAATTCTCTTAATCTCTCTGAAATTGCGGAGATGAAAATAGTTTACCGTGGTGGAGTTGATAGTGAGGGTCGCCCTGTTATGGTTGTTGTGGGAGCTCATTTTCTACTGCGGTGTCTTGATCTTGAGCGATTTGTACTCTATGTGGTAAAGGAATTTGAGCCATTAATACAGAAGCCCTATACAATAGTGTACTTCCACTCAGCAGCTTCTTTGCAGCCTCGGCCAGATATGGGATGGATGAAGAGATTGCAGCAGATTCTTGGCCGAAAACACCAGCGTAATCTCCATGCAATATATGTTCTTCACCCAACCTTTGGATTGAAAGCTGCAGTATTGGCCATGCAATTGCTCGTGGATAATGTGGTATGGAACAAAGTTGTATACATCGATCGGCTACTGCAGCTATTCAAATACGTTCCTCGTGAGCAGTTGACCATCCCCGACTTTGTATTTCAGCACGACTTAGAAGTAAATGGAGGGAAGGGCTTGATTGTAGATCCTCGAACAAAGTACGTATACCATCGGCCTTAA 1680 43.69 MYRTVATSAATTTTTDSLDYVVNLDQIPRWSDAEHRSSLEFVNEDPSFSNSYFPDPLTSPSDAEGGTNGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNENLDEAHSSPGLHAAAGPGLLDECGTLGGCRTGMAKVTNAYDLPARKVIHTVGPKYAVKYHTAAENALSHCYRSCLELLIENGLQSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQRDKIKAVVFCTTSSVDTEIYKRLLPLYFPRDKHEEEVALSKLPADVGDENGETIIDERKIRIKPLPKKNVPKPPPVPNDTPVSDVRLTRRNSSYLDSYLDPAFMALIKDPDQRRKEQWEKTAQAQTGWNYGRMLGFGDLGGPPLSAAEEYSLHSRYLAKANSLNLSEIAEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEFEPLIQKPYTIVYFHSAASLQPRPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNVVWNKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVYHRP 559
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7607178 7625643 - MELO3C002919.2.1 Cme09g00680 337540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g00680 559 Pfam Macro domain 100 212 IPR002589 -
Cme09g00680 559 SUPERFAMILY CRAL/TRIO domain 388 527 IPR036865 -
Cme09g00680 559 Pfam Divergent CRAL/TRIO domain 406 537 IPR001251 -
Cme09g00680 559 Gene3D Leucine Aminopeptidase, subunit E, domain 1 14 256 IPR043472 -
Cme09g00680 559 CDD Macro_GDAP2-like 82 250 IPR035793 -
Cme09g00680 559 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 1 539 - -
Cme09g00680 559 Gene3D - 389 540 IPR036865 -
Cme09g00680 559 ProSiteProfiles Macro domain profile. 71 251 IPR002589 -
Cme09g00680 559 PANTHER APPR-1-P PROCESSING ENZYME FAMILY PROTEIN 1 539 - -
Cme09g00680 559 MobiDBLite consensus disorder prediction 288 307 - -
Cme09g00680 559 SMART YBR022w_8 83 212 IPR002589 -
Cme09g00680 559 SUPERFAMILY Macro domain-like 73 280 IPR043472 -
Cme09g00680 559 SMART sec14_4 390 536 IPR001251 -
Cme09g00680 559 CDD SEC14 394 530 IPR001251 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g02350 Cme-Chr6:30830612 Cme09g00680 Cme-Chr9:7607178 3.38E-12 dispersed
Cme09g00680 Cme-Chr9:7607178 Cme10g01242 Cme-Chr10:13075659 2.10E-14 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g00680 K24997 - csv:101209942 1086.25