Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g00823 ATGGCATCCGCCATGGCCAAACCCAAAACTCAGAGAAAGCTCAGCAGACATACCCACGAAAACCAGAAACCAAATCCACAGAAGGCAGAGAAGCCGCCGTCTTGGGCAGTTGTGAGAGGCATATTAAGTTGCAAATACCTGCAGCCTCAGCAGCAACAACATCAATTACCACGCAAAGAGAAACAGGAGCAAGCAACAGAAGAAAATGGCAAGAACTGTAAGAAAATGAGGTGTTCAGGTTCACTCTGTAGCAACACCAAGGTAACACACAGGCTTGAGGCAGCTGCATCCCCTGAAGTTCACAAGAAAAGGGTATTAACTTCAATGGGTTCAAGAAACAATGAATCTTCAAGTTCGAATAGATCCACCAAAACTCTTGTTTTGAATGAACAAACAACTGGTGTTTTATCAGCCACGTCTTCATCTTTATCTGCATCATCTTCTTCTTCAAATTCCTCCAACGGAGCATCTTTCAGGGGAATGCCTTTCAGAAGGTTCTACGGCTGTTATGAATGTAAAATGGTGATTGACCCTGTTATTGGGATGACTAGAGATCCTTCTCTTAGAGCGACCATTTGCCCTTGTCCTCAATGTGGTGAGATTTTCATGAAACCTGAAACTTTGGAGCTTCACCAGACTGTTAGACATGCCGTATCTGAGCTTGGTCCTGAAGACACGAGCAAGAACATAGTGGAAATCATATTCCAGTCGAGTTGGCTGAAAAAGCAAACCCCAATTTGCAAAATTGAAAGGATTCTCAAAGTCCAGAACACTCCAAAAACCATCTCGAAATTCGAGGAATACAGGGACTCCATAAAAGCCAAAGCTACCAAACTTCCAAAGAAGTACCCACGTTGTATAGCAGACGGTAACGAACTCCTAAGGTTCCACTGCACCACCTTGAACTGTTCATTGGGTTTCAATGGCTCTTCCAACCTCTGCAGTTCAATCCCACAATGCAATGTCTGTAGCATAATCAAGAATGGGTTCAAGGTGGCGGCAGAGGCAACCGGGGGGGACTCTGGAAAGGGAATTCTAACTACTGCTACAAGTGGAAAGGCTCACGATAGTGTCGGAGTATCATCAGACGGCGGCGACGACAAAAGAGCTATGCTGGTTTGCCGGGTAATAGCTGGGAGAGTGAAGAAGAGTCCAGAAGGCAGCATGGAAGATTACGACTCATTGGCCGGAGCAGCAGGCATGTATTCCAATTTGGATGAGTTGTATGTGTTCAGTCCCAAGGCAATATTGCCTTGTTTTGTTGTTATTTATGGAGGTTTTTAA 1284 44.86 MASAMAKPKTQRKLSRHTHENQKPNPQKAEKPPSWAVVRGILSCKYLQPQQQQHQLPRKEKQEQATEENGKNCKKMRCSGSLCSNTKVTHRLEAAASPEVHKKRVLTSMGSRNNESSSSNRSTKTLVLNEQTTGVLSATSSSLSASSSSSNSSNGASFRGMPFRRFYGCYECKMVIDPVIGMTRDPSLRATICPCPQCGEIFMKPETLELHQTVRHAVSELGPEDTSKNIVEIIFQSSWLKKQTPICKIERILKVQNTPKTISKFEEYRDSIKAKATKLPKKYPRCIADGNELLRFHCTTLNCSLGFNGSSNLCSSIPQCNVCSIIKNGFKVAAEATGGDSGKGILTTATSGKAHDSVGVSSDGGDDKRAMLVCRVIAGRVKKSPEGSMEDYDSLAGAAGMYSNLDELYVFSPKAILPCFVVIYGGF 427
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10602865 10604570 - MELO3C003044.2.1 Cme09g00823 337683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g00823 427 MobiDBLite consensus disorder prediction 109 128 - -
Cme09g00823 427 ProSiteProfiles Zinc finger C2H2 type domain profile. 193 221 IPR013087 -
Cme09g00823 427 MobiDBLite consensus disorder prediction 1 35 - -
Cme09g00823 427 MobiDBLite consensus disorder prediction 48 74 - -
Cme09g00823 427 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 34 424 - -
Cme09g00823 427 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 34 424 - -
Cme09g00823 427 MobiDBLite consensus disorder prediction 94 108 - -
Cme09g00823 427 MobiDBLite consensus disorder prediction 56 74 - -
Cme09g00823 427 SUPERFAMILY ADP-ribosylation 218 425 - -
Cme09g00823 427 MobiDBLite consensus disorder prediction 94 128 - -
Cme09g00823 427 ProSitePatterns Zinc finger C2H2 type domain signature. 193 216 IPR013087 -
Cme09g00823 427 Gene3D - 217 425 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g00474 Cme-Chr4:3750890 Cme09g00823 Cme-Chr9:10602865 3.10E-96 dispersed
Cme04g00792 Cme-Chr4:9675644 Cme09g00823 Cme-Chr9:10602865 1.51E-69 dispersed
Cme08g00365 Cme-Chr8:2287702 Cme09g00823 Cme-Chr9:10602865 5.40E-52 dispersed
Cme09g00823 Cme-Chr9:10602865 Cme11g01366 Cme-Chr11:20463343 2.70E-64 dispersed
Cme09g00823 Cme-Chr9:10602865 Cme06g02044 Cme-Chr6:25731769 1.15E-76 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
41938 None None None None Cme TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g00823 - - csv:101220433 793.882