Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme09g00872 | ATGGGATCCATAGATGTCCAATCAACCAGCGCTGAAAATGGATCCGCCCCCGCCTCCTCTGCTGATGGTCGTCAAAAGTCCCTTCTCACCGACGGTATGAACCACATATCTAACGACCCAGACGGAACGCCCCCTGATAAGCCTAAGGAGTTGGGCCCGACCAAGAAACGAATGTCCTCCATGCTTCCTCTGGATGTCGGGACCCGTGTCATGTGCCGCTGGAGGGACGGGAAGTACCATCCCGTTAAGGTCATCGAACGTCGCAAGTTGCAAGCAACTGGTTTCAGTGATTACGAATACTATGTCCATTACACCGAGTTCAATAGGAGACTTGATGAGTGGGTGAAGCTTGACCAACTTGATCTTGATTCGGTCGAGACGGTTGTTGATGAGAAAGTCGAGGACAAGGTAACAGGACTGAAGATGACCCGGCACCAGAAGCGGAAGATCGACGAAACCCATGTTGAGGGCCATGAGGAACTTGATGCTGCCAGCTTGAGGGAGCATGAAGAATTCACGAAAGTGAAAAATATTGCAACAATTGAACTTGGAAGATATGAGATTGAGACATGGTATTTCTCCCCATTTCCACCAGAGTACAATGACACTACAAAGCTCTATTTTTGTGAGTTTTGTCTCAACTTCATGAAGCGCAAAGAACAACTCCAGAGACATATGAGGAAGTGTGATCTGAAGCATCCTCCTGGTGATGAAATATATCGATGCGGTACTTTGTCAATGTTTGAGGTTGACGGAAAAAAGAACAAGGTTTATGGGCAGAATCTGTGTTACTTAGCAAAGTTATTTCTGGACCACAAGACTCTCTACTATGATGTTGACCTTTTTCTGTTTTATGTCCTGTGTGAGTGTGATGATCGAGGGTGTCACATGGTTGGATATTTTTCGAAGGAAAAGCATTCAGAGGAATCCTATAATTTGGCATGCATTCTCACCCTTCCTCCTTATCAAAGGAAGGGCTACGGGAAGTTCTTAATAGCATTTTCTTATGAACTCTCGAAGAAGGAAGGTAAAGTTGGCACTCCTGAAAGACCTCTTTCAGACCTTGGGTTGGTGAGCTACAGAGGATACTGGACCAGAGTTCTTTTGGACATCTTGAAAAAGCACAAAGCCAATATCTCTATCAAGGAGCTAAGTGACATGACAGCTATCAAGGCCGAAGATATTTTGAACACACTTCAAAGCCTGGAGTTGATACAATACAGGAAAGGGCAACATGTTATATGTGCCGACCCTAAGGTGCTGGATCGTCATCTCAAAGCTGCTGGTCGTGGGGGCCTAGAGGTGGATGTGAGCAAATTGATCTGGACTCCATACAGAGAACAGGGTTGA | 1350 | 45.78 | MGSIDVQSTSAENGSAPASSADGRQKSLLTDGMNHISNDPDGTPPDKPKELGPTKKRMSSMLPLDVGTRVMCRWRDGKYHPVKVIERRKLQATGFSDYEYYVHYTEFNRRLDEWVKLDQLDLDSVETVVDEKVEDKVTGLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDTTKLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRCGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLVSYRGYWTRVLLDILKKHKANISIKELSDMTAIKAEDILNTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLEVDVSKLIWTPYREQG | 449 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 11730567 | 11737175 | + | MELO3C022788.2.1 | Cme09g00872 | 337732 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme09g00872 | 449 | Gene3D | - | 232 | 444 | - | - | |
| Cme09g00872 | 449 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 174 | 445 | IPR016181 | - | |
| Cme09g00872 | 449 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
| Cme09g00872 | 449 | PANTHER | HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2 | 11 | 448 | - | - | |
| Cme09g00872 | 449 | MobiDBLite | consensus disorder prediction | 1 | 60 | - | - | |
| Cme09g00872 | 449 | Pfam | MOZ/SAS family | 234 | 411 | IPR002717 | GO:0004402|GO:0006355|GO:0016573 | |
| Cme09g00872 | 449 | Gene3D | - | 54 | 173 | - | - | |
| Cme09g00872 | 449 | PANTHER | HISTONE ACETYLTRANSFERASE | 11 | 448 | - | - | |
| Cme09g00872 | 449 | ProSiteProfiles | MYST-type histone acetyltransferase (HAT) domain profile. | 173 | 444 | IPR002717 | GO:0004402|GO:0006355|GO:0016573 | |
| Cme09g00872 | 449 | Pfam | MYST family zinc finger domain | 175 | 229 | IPR040706 | - | |
| Cme09g00872 | 449 | SUPERFAMILY | Chromo domain-like | 55 | 174 | IPR016197 | - | |
| Cme09g00872 | 449 | Gene3D | - | 174 | 230 | - | - | |
| Cme09g00872 | 449 | CDD | NAT_SF | 285 | 343 | - | - | |
| Cme09g00872 | 449 | Gene3D | - | 352 | 432 | IPR036388 | - | |
| Cme09g00872 | 449 | SMART | chromo_7 | 78 | 137 | IPR000953 | - | |
| Cme09g00872 | 449 | CDD | CBD_MOF_like | 67 | 136 | - | - | |
| Cme09g00872 | 449 | Pfam | RNA binding activity-knot of a chromodomain | 64 | 122 | IPR025995 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme09g00872 | K11308 | - | csv:101217824 | 903.664 |