Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g00880 ATGGGTTCTTTGCCTTCCCAAACTTTCTCCGTCGAAATTACCGACAACCATATTCATGCCGGCGCCGTTGCCGTTCCCGGAGCACAAACATCTGAATGGCTTCTCAATTCTCCCAACCCTCCAACTTTCTGGGAACAAATTGTCGGAGCCATCAACGAAAATGCCATTCCTCGAAGTTGCATAAAGAACCCCAACAAAAAGGTTTCTTCTTTAGGCTCTGGAAAACAGAGCATTTTCAAAACCATAGTTACCCTTTTGCAAAGAGTGTTCCCCATCCTTAAATTAGCTCGCAATTACAAAGCTTCCAAGTTCAAAAACGACCTCATGGCTGGTTTAACACTCGCCAGTCTTAGCATCCCTCAAAGTATTGGGTATGCTAATTTGGCGAAGCTTGATCCGCAGTTTGGTCTATATACAAGTGTTGTTCCTCCTTTGATTTATGCATTTATGGGGAGTTCAAGAGAGATCGCAATTGGACCAGTAGCTGTAGTTTCATTGCTTCTTTCATCTATGCTTCAAGAAATTCAAGATCCTGTTGCTGATCCTGTTGCTTATAGACGCCTTGTTTTCACTGTCACTTTGTTTGCTGGGATTTTCCAAGCTTCATTTGGACTCTTGAGATTGGGTTTTCTTGTGGACTTTTTGTCTCATGCTGCCATTGTTGGGTTCATGGCTGGAGCTGCCATTCTCATTGGTCTTCAACAAATGAAAGGCTTGCTTGCAATCAGCAATTTCACTACCAAAACTGATGTGGTTTCTGTTTTGGAATCTGTTGTCAAATCTGTTCATCAGACATGGTACCCTTTGAACATTGTACTTGGCTGCTCCTTCCTAATCTTTCTCCTTGTAGCCAGGTTCATAGGGAGAAGGAATAAGAAGCTGTTTTGGGTGTCAGCCATTGCTCCTCTCATATCAGTAATTCTTTCAACTTTGATAGTGTTTGTTTCAAGAGCTGACAAACATGGAGTCAAGATCGTGAAGGAAGTGAAAGAAGGACTGAACCCAATTTCCATTCATCAGCTTCAATTGAATAGCTCAACTGTTGGGTTAGCTGCAAAATCTGGCCTCATTGCTGCCGTTATAGCTCTCACAGGAAGCTATTGCGGTAGGCCGTTCATTTGCCTCGATTAA 1131 42.79 MGSLPSQTFSVEITDNHIHAGAVAVPGAQTSEWLLNSPNPPTFWEQIVGAINENAIPRSCIKNPNKKVSSLGSGKQSIFKTIVTLLQRVFPILKLARNYKASKFKNDLMAGLTLASLSIPQSIGYANLAKLDPQFGLYTSVVPPLIYAFMGSSREIAIGPVAVVSLLLSSMLQEIQDPVADPVAYRRLVFTVTLFAGIFQASFGLLRLGFLVDFLSHAAIVGFMAGAAILIGLQQMKGLLAISNFTTKTDVVSVLESVVKSVHQTWYPLNIVLGCSFLIFLLVARFIGRRNKKLFWVSAIAPLISVILSTLIVFVSRADKHGVKIVKEVKEGLNPISIHQLQLNSSTVGLAAKSGLIAAVIALTGSYCGRPFICLD 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11955391 11961177 + MELO3C022802.2.1 Cme09g00880 337740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g00880 376 ProSitePatterns SLC26A transporters signature. 133 154 IPR018045 GO:0008271|GO:0008272
Cme09g00880 376 PANTHER SULFATE TRANSPORTER 28 372 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cme09g00880 376 PANTHER SULFATE TRANSPORTER 2.2 28 372 IPR030315 GO:0008272|GO:0015116
Cme09g00880 376 Pfam Sulfate permease family 104 364 IPR011547 GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme09g00880 Cme-Chr9:11955391 Cme07g00923 Cme-Chr7:9689593 6.25E-97 dispersed
Cme09g00879 Cme-Chr9:11871499 Cme09g00880 Cme-Chr9:11955391 1.25E-112 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g00880 K17469 - csv:101211892 663.299