Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme09g00898 | ATGGCCGTGAGCGGCGGAAGAGAGAAGGAGGAGGAAGCTGGAAACTACCGGCGGACGGATTCGGATGGAGAAGTGGAATATACGGTGGAGAGCGTTCGTGAACGGATCACATCGTCGAGAGGGAGTCGATTCAATTTGATTCAGACACAATTGAGGATTGACCAGAATCGTAGAAGATTTAGCCGTGAAAATCTCATCAATGGCATTAAGTGCCTCGTTATCCTCCCTGACAGCAGATGGTATCGGGCGTGGACGAAGTTCATACTGATATGGGCAGTGTACTCTTCCTTCTTCACACCCATGGAATTCGGGTTCTTCAGGGGATTACCGGAGAATTTATTTATACTCGACATTGTTGGACAGATTGCTTTCCTCCTTGACATTGTTTTCCAATTCTTCCTTGCCTACAGAGACAAACAGACATACCGAATGGTCTATAAACGCTCTCCAATAGCACTCAAGTACTTGAAATCCACTTTTGTGACTGATTTGCTTAGCTGTATGCCATGGGACATCATTTATAAGGCTTGTGGGAGAAGAGAGGAGGTGAGATACCTTCTATGGATAAGGTTATTTCGGGTGCGGAAAGTTGATGCTTTTTTTAAGACGATGGAGAAGGATATACGTATTAATTATATGTTTACTAGAATTGTAAAGCTACTTGTTGTTGAACTTTACTGCACACATACTGCGGCCTGCATCTTTTACTATTTGGCAACTACTCTTCCCGCTTCTGAAGAAGGGTACACATGGATCGGAAGCTTAAAACTAGGGGACTACAGTTACTCACATTTCAGAGAGATTGATTTATGGAAACGCTACACCACATCTTTATATTTTGCCATTGTCACTATGGCCACTGTTGGTTATGGTGATATACATGCAGTCAACTTAAGGGAAATGATATTCATTATGATTTACGTGTCATTTGACATGGTTCTCGGTGCTTACTTGATTGGTAACATGACTGCATTGATTGTAAAAGGATCCAAGACGGTGAAATTCAGGGATAAAATGGCAGATGTAATGAAATACATGAACAGAAATAGACTTAGCAGGGAAATCCGTGATCAGATCAAAGGTCACTTACGTTTACAGTATGAAAGTAGCTACACTGAGGCTACTGTTCTACAGGACATACCAATATCAATCCGTGCTAAGATTTCCCAAACACTGTACTTGCCTTACGTTCAGAATGTTTCTCTCTTTAGAGGATGCTCTCCAGAGTTCATCAATCAAATAGTTATTAGACTCCATGAAGAGTTTTTTCTGCCTGGCGAGGTGATAATGGAACAAGGAAATGTGGTTGATCAACTTTATTTTGTCTGTCATGGTGTGCTGGAGGAATTGGGAATAGGACAAGATGGTTCAGAAGAGACCATAGATTTACTACAACCCAACAGCTCTTTTGGAGAGATTTCAATTCTTTGCAATATTCCTCAACCTTATACAGTTCGAGTGTGTGAATTGTGTAGACTCTTACGCATTGATAAGCAGTCATTTACAAATATCCTTGACATATACTTTTACGACGGGAGAAAAATCTTGAACAACCTTCTAGAGGGAAAAGAAACAAACCTTCGAGTTAAGCAATTGGAGTCAGATATCACATTTCATATTGGCAAACAAGAAGCTGAACTTGCTCTCAAGGTGAACAGTGCAGCATATAATGGAGATCTGTACCAATTAAAAGGTCTTGTTCGAGCTGGAGCTGATCCAAACAAGACTGATTATGACGGGAGGTCGCCTTTGCATCTTGCGGCATCCAGAGGATTCGAGGATATAGTAGCTTTCCTTATTCAGGAAGGTGTAAACATTGACCTTAAAGATAATTTTGGCAATACACCATTAATGGAAGCCATCAAGAATGGGAACGACCAAGTTGCTGCTTTGCTTTCTAAAGAAGGTGCTTCATTGAAGGTTGATAGTCCTGGTAGTTTCCTCTGTACAGCAGTTTCAAGGGGTGATTCAGATCTTGTTAAGAGATTATTGTGCTATGGAATTGATCCCAACTCCAAAGATTATGATTCTCGAACTCCGCTACATATAGCTGTCTCAGAAGGGCTAACTTTGATGGCAAAGTTGCTTTTAGAATCTGGGGCTAGTGTTTTCTCGAAGGACAGATGGGGAAACACTCCGCTTGATGAAGGCCGAATTTGTGGAAACAAAAGTATGCTTAAGCTCTTGGAAGAGGCAAAAGCTTCACAGTTGTCAGAATCTCCTTATTCCTCTCGAGAATTCACAGACAAAAAACCCACAAAGAAATGTACGGTGTTTCCCTTCCACCCATGGGATCCTGAAGAAAACAAAAGACCTGGAATTGTGCTATGGGTTCCACTAACCATTGAAGAGCTCATCAAAGAATCATCAGAACAGCTACAAGTTTCAGGTGAATGTTGTATATTATCAGAAGACGGAGGTAAAATTCTTGATGTCCATATGCTTGATGAATCTCAAAAGCTGTATCTAGTTCCTGAAACTCATTAA | 2487 | 41.01 | MAVSGGREKEEEAGNYRRTDSDGEVEYTVESVRERITSSRGSRFNLIQTQLRIDQNRRRFSRENLINGIKCLVILPDSRWYRAWTKFILIWAVYSSFFTPMEFGFFRGLPENLFILDIVGQIAFLLDIVFQFFLAYRDKQTYRMVYKRSPIALKYLKSTFVTDLLSCMPWDIIYKACGRREEVRYLLWIRLFRVRKVDAFFKTMEKDIRINYMFTRIVKLLVVELYCTHTAACIFYYLATTLPASEEGYTWIGSLKLGDYSYSHFREIDLWKRYTTSLYFAIVTMATVGYGDIHAVNLREMIFIMIYVSFDMVLGAYLIGNMTALIVKGSKTVKFRDKMADVMKYMNRNRLSREIRDQIKGHLRLQYESSYTEATVLQDIPISIRAKISQTLYLPYVQNVSLFRGCSPEFINQIVIRLHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEELGIGQDGSEETIDLLQPNSSFGEISILCNIPQPYTVRVCELCRLLRIDKQSFTNILDIYFYDGRKILNNLLEGKETNLRVKQLESDITFHIGKQEAELALKVNSAAYNGDLYQLKGLVRAGADPNKTDYDGRSPLHLAASRGFEDIVAFLIQEGVNIDLKDNFGNTPLMEAIKNGNDQVAALLSKEGASLKVDSPGSFLCTAVSRGDSDLVKRLLCYGIDPNSKDYDSRTPLHIAVSEGLTLMAKLLLESGASVFSKDRWGNTPLDEGRICGNKSMLKLLEEAKASQLSESPYSSREFTDKKPTKKCTVFPFHPWDPEENKRPGIVLWVPLTIEELIKESSEQLQVSGECCILSEDGGKILDVHMLDESQKLYLVPETH | 828 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 12374775 | 12384721 | - | MELO3C022820.2.1 | Cme09g00898 | 337758 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme09g00898 | 828 | Pfam | Cyclic nucleotide-binding domain | 422 | 506 | IPR000595 | - | |
Cme09g00898 | 828 | ProSiteProfiles | Ankyrin repeat profile. | 612 | 644 | IPR002110 | GO:0005515 | |
Cme09g00898 | 828 | PRINTS | EAG/ELK/ERG potassium channel family signature | 117 | 127 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cme09g00898 | 828 | PRINTS | EAG/ELK/ERG potassium channel family signature | 226 | 236 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cme09g00898 | 828 | PRINTS | EAG/ELK/ERG potassium channel family signature | 274 | 291 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cme09g00898 | 828 | PRINTS | EAG/ELK/ERG potassium channel family signature | 318 | 327 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cme09g00898 | 828 | PANTHER | POTASSIUM CHANNEL AKT1 | 7 | 827 | IPR045319 | GO:0005249|GO:0006813 | |
Cme09g00898 | 828 | Gene3D | - | 645 | 741 | IPR036770 | - | |
Cme09g00898 | 828 | ProSiteProfiles | Ankyrin repeat region circular profile. | 676 | 708 | - | - | |
Cme09g00898 | 828 | ProSiteProfiles | Ankyrin repeat region circular profile. | 612 | 641 | - | - | |
Cme09g00898 | 828 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Cme09g00898 | 828 | Pfam | Ankyrin repeats (3 copies) | 649 | 729 | IPR002110 | GO:0005515 | |
Cme09g00898 | 828 | Pfam | Ankyrin repeats (3 copies) | 554 | 640 | IPR002110 | GO:0005515 | |
Cme09g00898 | 828 | PRINTS | Ankyrin repeat signature | 580 | 595 | IPR002110 | GO:0005515 | |
Cme09g00898 | 828 | PRINTS | Ankyrin repeat signature | 692 | 706 | IPR002110 | GO:0005515 | |
Cme09g00898 | 828 | Gene3D | Helix hairpin bin | 329 | 385 | - | - | |
Cme09g00898 | 828 | SUPERFAMILY | Ankyrin repeat | 551 | 731 | IPR036770 | - | |
Cme09g00898 | 828 | SMART | cnmp_10 | 402 | 520 | IPR000595 | - | |
Cme09g00898 | 828 | CDD | CAP_ED | 402 | 516 | IPR000595 | - | |
Cme09g00898 | 828 | ProSiteProfiles | KHA domain profile. | 755 | 828 | IPR021789 | - | |
Cme09g00898 | 828 | ProSiteProfiles | Ankyrin repeat profile. | 676 | 708 | IPR002110 | GO:0005515 | |
Cme09g00898 | 828 | ProSiteProfiles | Ankyrin repeat region circular profile. | 579 | 611 | - | - | |
Cme09g00898 | 828 | SMART | ANK_2a | 643 | 672 | IPR002110 | GO:0005515 | |
Cme09g00898 | 828 | SMART | ANK_2a | 676 | 705 | IPR002110 | GO:0005515 | |
Cme09g00898 | 828 | SMART | ANK_2a | 579 | 608 | IPR002110 | GO:0005515 | |
Cme09g00898 | 828 | SMART | ANK_2a | 612 | 641 | IPR002110 | GO:0005515 | |
Cme09g00898 | 828 | SMART | ANK_2a | 709 | 738 | IPR002110 | GO:0005515 | |
Cme09g00898 | 828 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 402 | 522 | IPR000595 | - | |
Cme09g00898 | 828 | SUPERFAMILY | cAMP-binding domain-like | 330 | 520 | IPR018490 | - | |
Cme09g00898 | 828 | PANTHER | POTASSIUM CHANNEL SKOR-LIKE | 7 | 827 | - | - | |
Cme09g00898 | 828 | Gene3D | Jelly Rolls | 386 | 526 | IPR014710 | - | |
Cme09g00898 | 828 | ProSiteProfiles | Ankyrin repeat profile. | 579 | 611 | IPR002110 | GO:0005515 | |
Cme09g00898 | 828 | Gene3D | - | 545 | 644 | IPR036770 | - | |
Cme09g00898 | 828 | Pfam | KHA, dimerisation domain of potassium ion channel | 754 | 823 | IPR021789 | - | |
Cme09g00898 | 828 | Gene3D | - | 84 | 328 | - | - | |
Cme09g00898 | 828 | Pfam | Ion transport protein | 82 | 327 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
Cme09g00898 | 828 | SUPERFAMILY | Voltage-gated potassium channels | 76 | 327 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme09g00694 | Cme-Chr9:7878110 | Cme09g00898 | Cme-Chr9:12374775 | 2.81E-12 | dispersed | |
Cme09g00898 | Cme-Chr9:12374775 | Cme12g01221 | Cme-Chr12:20340316 | 1.00E-84 | dispersed | |
Cme09g00898 | Cme-Chr9:12374775 | Cme12g01253 | Cme-Chr12:20660326 | 5.77E-13 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme09g00898 | K21867 | - | csv:101210912 | 1630.54 |