Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01016 ATGTCAAAAGAGGAGGTTATAATTTTGGACTGTTCGCTTAGCCCATTTTGCAATAGGGTTAAGATTGCTTTGAGTGAGAAGGGAGTGAGTTATGAGAGTAAGGAAGAGGATTTGTTTGGTTCCAAAGGTGGGAAAAGTGAGTTGTTGCTCAAATCTAACCCTATTTATAAGAAAGTGCCTGTTCTCTTACATAACGGTAAGCCATTGAATGAAAGCTCCATTATTGTTAGCTATATTGATGAGACATGGCCTTCTTCTTCCCCACTTCTTCCTTCCTCGCCCTACGAGAGAGCTCAAGCTCGGTTCTGGATTGACTACATCGACAAAAAGGTATTTGATGTGGGTTCCAAGATTTGGAGAAGCAACGGAGAAGAGCAAGAGGAAGCCAAGAAAGAGTTGATAGAGATTTTGAAGCAATTGGAAGAAGCTTTAGGGGACAAAGATTTCTTTGGAGGTGAAAAGTTTGGGATTGTGGATGTGATAGCAATCCCATTCACAAGTTGGTTCTATGCTTATGAGAAAGTTGGGAACTTCAAAGTGGAAGAATGTTGCCCTAAATTCTCAGCTTGGGAAAAGAGGTGTTTGCAAAAGGACACTGTTTCAAGTGTTCTTCCTTGCCCTGATAAGATTTATAACTTTATCACCTCCATGAGAAAGAACCTTGGACTTGAATAG 675 40.59 MSKEEVIILDCSLSPFCNRVKIALSEKGVSYESKEEDLFGSKGGKSELLLKSNPIYKKVPVLLHNGKPLNESSIIVSYIDETWPSSSPLLPSSPYERAQARFWIDYIDKKVFDVGSKIWRSNGEEQEEAKKELIEILKQLEEALGDKDFFGGEKFGIVDVIAIPFTSWFYAYEKVGNFKVEECCPKFSAWEKRCLQKDTVSSVLPCPDKIYNFITSMRKNLGLE 224
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 14277346 14278895 - MELO3C025097.2.1 Cme09g01016 337876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01016 224 ProSiteProfiles Glutaredoxin domain profile. 1 97 - -
Cme09g01016 224 SFLD Main (cytGST) 2 221 - -
Cme09g01016 224 Pfam Glutathione S-transferase, C-terminal domain 122 197 IPR004046 -
Cme09g01016 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 216 IPR045073 -
Cme09g01016 224 Coils Coil 123 146 - -
Cme09g01016 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 87 IPR004045 -
Cme09g01016 224 SFLD Main.3: Omega- and Tau-like 2 221 IPR045073 -
Cme09g01016 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 93 223 IPR010987 -
Cme09g01016 224 Gene3D Glutaredoxin 2 92 - -
Cme09g01016 224 SUPERFAMILY GST C-terminal domain-like 81 220 IPR036282 -
Cme09g01016 224 Pfam Glutathione S-transferase, N-terminal domain 12 81 IPR004045 -
Cme09g01016 224 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 6 216 - -
Cme09g01016 224 CDD GST_N_Tau 6 83 - -
Cme09g01016 224 SUPERFAMILY Thioredoxin-like 7 111 IPR036249 -
Cme09g01016 224 CDD GST_C_Tau 95 217 IPR045074 GO:0004364|GO:0006749
Cme09g01016 224 Gene3D - 93 224 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g01418 Cme-Chr7:19909789 Cme09g01016 Cme-Chr9:14277346 2.60E-80 dispersed
Cme07g01419 Cme-Chr7:19912191 Cme09g01016 Cme-Chr9:14277346 4.06E-79 dispersed
Cme09g01016 Cme-Chr9:14277346 Cme08g02465 Cme-Chr8:31585426 3.85E-51 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01016 K00799 - csv:101213628 414.846