Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01028 ATGGACAACAACAACAACAACAATCTACCTGAGAATCAACCCTCCGATGCCCCCAAATTGGATTCTGATGATGCCACCAATCTCCCTCATCAAACCCATGCCTCTGCTGTAAATTCTAATGAAAATTTGACAGATCAAGATCACAATCACGATAAGAATCAGGATCAGGATCAGGAGAACAAGGACAAGGAGAAGAATGAGGAGGACGAGGAGGAGAACAAGAAGGACAATGAAGAAGAAGAAAGGAAGGACGGAGAGGAAAAGACGGAAGAGGAGGAAGAGTCCAAGGATGAACCAGATCTTCATTACAATCTCAATACGATTCTTGAAGATGTCGATCAATTTCTCTCAACTCCTCACGGTTCTCGTGATCGAGAGGAAGATTCTGCTGTTGACATTCCCAAGTTCATCGACAAATTCTTGGATCTCGTGGATGCCAAGATTGAGCAATACAATAACGAGGAATCCAATGCGAAGGAGAAAGAATGTCGAGTGCCGGAGGATGACTCATCGTTCCTCGAAGCGATTGATAGGATATCCAAGCTAAAAACTGCAATTCACGAAATGAAATTGGAAGAGGAGAAGAATTCGTTGATCAATCGCATCGGAAGCACTCAACAGCAAGCGATTTCTTATTTGGAAGAAGAGTTCAGATTCTTTCTCGAGGAGTCTAGAAATAGCGATTCTGATCCTGCTGCTGAAACGAAAGGTAAACAAGAACAGGATCGTTGTGCATTACCTGAGGCTGAGTCCGATCAGCCCCAGTTTCCAGGTTACTCCGAGGAGATCGTCAACTATTTGAACAAAATCGCTAAGCGAATGATTTCGGGTGGATACGAATCGGAATGCTGCCAAGTGTACATGGTTGCGAGAAGAAACATATTCGAAGATGCCTTACTAAAGCTCGGATTTGAAAAACACAGCATCGATGATATCCAGAAGATGAGTTGGGAATCAATGGAGAGGGAGATCGCTACATGGATTAAAACGATCAAGCAATGCGCCACCATTTTGTTCTCTGGCGAACGGAATCTCGCCGAATCTGTATTTTCATCATATCCTCCGATTTCCGCCAGTCTGTTTAGCAATCTAACTCGCGGCATTGTGATTCAACTGCTAAATTTCTCAGAAGGAGTAGCAATGACAAAACGCTCCGCAGAGAAATTGTTCAAACTCCTTGATATGTACGAAGCTCTTCGCGATATGGTTCCAAAAATGGAAACATTATTTCCAGTAGAATCCGCGAACGAGCTCAAAACAGAGACCACAACCGCTCGAACTCGTCTTGGCGAAGCAGCGATTTGCATATTTTGCGATCTCGAAAACTCAATCAAAGCAGACACCGGAAAAACTCCGGTACCGGGCGGCGCCGTTCATCCGTTAACTCGATACACCATAAACTACTTGAAATACGCTTGCGAGTACAGGAACACACTGGAACAAATTTTCAAAGAGCATTCAAAGATCGAAAGAGCCGATTCCACTAGCCGACCCCATTTCGAAGGCGAACAAGCACCGAGTTACAACCCCAGCGCTGACAATCAATCACCATTCTCGGTAGAACTGATGCGAGTGATGGAGCTTTTGGATTCAAATCTGGAAGCAAAATCAAAGCTATACAGAGATGTAGCACTGAGTTCGATCTTCATGATGAACAATGGACGATACATCTTACAGAAAATCAAAGGATCTGCAGATATCCACGAACTAGTGGGTGATTCATGGTACAGGAAGAGATCTTCAGATCTACGCCAATACCACAAGAATTACCAGAGAGAAACATGGGGTAGATTATTAGGTTGTTTGAACCACGAAGGATTAACAGTACACGGGAAAGTGGTAAAGCCAGTGCTGAAAGAAAGGTTTAAAGGATTCAACGCATTGTTCGAAGAGATTCACAAAACACAAAGCTCATGGATCATAAGCGACGAACAACTTCAATCGGAGCTGCGAGTATCAATATCGGCCGTGATGATTCCGGCGTATAGATCATTTTTAGCTAGGTTTTCACAGTATTTGGATCCAGGGAGACAAACAGAGAAATACGTAAAGTTTCAACCTGAAGATATAGAGACATACATAGATGATTTGTTTGATGGAAATCCAAGCTCCATGGCAAGAAGGAGAACATAA 2133 43.32 MDNNNNNNLPENQPSDAPKLDSDDATNLPHQTHASAVNSNENLTDQDHNHDKNQDQDQENKDKEKNEEDEEENKKDNEEEERKDGEEKTEEEEESKDEPDLHYNLNTILEDVDQFLSTPHGSRDREEDSAVDIPKFIDKFLDLVDAKIEQYNNEESNAKEKECRVPEDDSSFLEAIDRISKLKTAIHEMKLEEEKNSLINRIGSTQQQAISYLEEEFRFFLEESRNSDSDPAAETKGKQEQDRCALPEAESDQPQFPGYSEEIVNYLNKIAKRMISGGYESECCQVYMVARRNIFEDALLKLGFEKHSIDDIQKMSWESMEREIATWIKTIKQCATILFSGERNLAESVFSSYPPISASLFSNLTRGIVIQLLNFSEGVAMTKRSAEKLFKLLDMYEALRDMVPKMETLFPVESANELKTETTTARTRLGEAAICIFCDLENSIKADTGKTPVPGGAVHPLTRYTINYLKYACEYRNTLEQIFKEHSKIERADSTSRPHFEGEQAPSYNPSADNQSPFSVELMRVMELLDSNLEAKSKLYRDVALSSIFMMNNGRYILQKIKGSADIHELVGDSWYRKRSSDLRQYHKNYQRETWGRLLGCLNHEGLTVHGKVVKPVLKERFKGFNALFEEIHKTQSSWIISDEQLQSELRVSISAVMIPAYRSFLARFSQYLDPGRQTEKYVKFQPEDIETYIDDLFDGNPSSMARRRT 710
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 14417486 14419618 + MELO3C025086.2.1 Cme09g01028 337888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01028 710 PANTHER EXOCYST COMPLEX PROTEIN EXO70 91 709 IPR004140 GO:0000145|GO:0006887
Cme09g01028 710 MobiDBLite consensus disorder prediction 224 247 - -
Cme09g01028 710 MobiDBLite consensus disorder prediction 493 513 - -
Cme09g01028 710 SUPERFAMILY Cullin repeat-like 167 699 IPR016159 -
Cme09g01028 710 MobiDBLite consensus disorder prediction 1 15 - -
Cme09g01028 710 MobiDBLite consensus disorder prediction 44 82 - -
Cme09g01028 710 MobiDBLite consensus disorder prediction 224 256 - -
Cme09g01028 710 Pfam Exo70 exocyst complex subunit 326 696 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cme09g01028 710 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 91 709 - -
Cme09g01028 710 MobiDBLite consensus disorder prediction 25 43 - -
Cme09g01028 710 Coils Coil 188 208 - -
Cme09g01028 710 Coils Coil 141 164 - -
Cme09g01028 710 MobiDBLite consensus disorder prediction 83 97 - -
Cme09g01028 710 MobiDBLite consensus disorder prediction 1 108 - -
Cme09g01028 710 Coils Coil 53 95 - -
Cme09g01028 710 Gene3D Exocyst complex component Exo70 147 708 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g01926 Cme-Chr7:24478955 Cme09g01028 Cme-Chr9:14417486 0 dispersed
Cme09g01028 Cme-Chr9:14417486 Cme12g00048 Cme-Chr12:469752 5.03E-130 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01028 K07195 - csv:101206040 1237.25