Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01069 ATGAGTGAAACCATCGAAAATTACTTGAGAAAGAACTTCGACCTCGAGTCCAAGAGTCCGTCTGAAGAGGCTCAAATGCGATGGCGATCTGCCGTTTCTATTGTCAAGAATCGCCGTCGGAGGTTTCGTATGGTTGCTGATCTCGAAAAGCGAGCTAAGGCTGAGGAGAAACGCAAGAAACTCCAGGAAAAGATACGAGTAGCTCTTTACGTACAAAAAGCAGCATTGCATTTCATTGATGCCGGGAAGCGAGGTGACTACAAGCTCTCCACAGAAGTTAGGGAAGCTGGTTATGGAGTTGAACCTGATGCATTAGCATCCATGGTTCAAACCCACAACACCAAGAGTTTGGAACATTATGGGGGCGTTAGGGGATTGGCAAGAGAATTAAACGTTTCTCTGAAAAATGGAATTGTTACAAGTGAAATACCTTCAAGGCAGAACATATACGGCATCAACCGTTATGTTGAGAAGCCTTCAAGAGGCTTTTGGATGTTTGTATGGGAAGCCCTGCATGATTTGACTCTTGTCATTCTCTTGGTTTCTGCTGTGATTTCCATTGGCGTTGGAAATGCAACTGAAGGTTGGCCTAAAGGCATGTACGATGGACTTGGAATAATAATGAGTATTTTTCTGGTTGTGATAGTAACGGCAATCAGTGACTATAATCAGTCTTTGCAATTTAAGGACTTGGAAAAGCAGAAGAAAAACATTATCATTCAAGTTACTCGAGATGGATGCAGACAGAAGGTTTCTATTTACGACTTGGTGGTTGGAGATATTGTTCATTTGTCTATTGGAGATCAAGTCCCTGCTGATGGTATTTTGGTGTCAGGCTACAGCTTATCAATTGACGAATCAAGCTTATCAGGTGAAAGTGAACCTGTAAACGTAGATGATAATAGGCCTTTTCTTCTAGCAGGGACCAAAGTGCAGGATGGATCTGGTAAAATGCTAGTTACCTCGGTTGGCATGAGAACTGAATGGGGAAGATTGATGGTCACTTTGAGTGAAGGAGGAGATGATGAAACACCACTTCAGGTAAAGCTTAATGGGGTTGCAACAATCATTGGAAAGATCGGCTTGGTATTCGCGGTGTTAACATTCATAGTTCTGATCTCAAGGTATTTTGTGTTCAAAGCATTACACAATCAAATTGAGCATTGGTCCTCCAAAGATGCATCAACGCTTCTGAATTACTTTGCCATTGCAGTAATTATAATTGTTGTTGCAGTTCCAGAAGGATTACCTCTGGCCGTAACACTAAGTCTTGCCTTTGCCATGAAAAGGTTAATGAAGGATAAGGCACTTGTGAGGCATCTCTCTGCTTGTGAGACTATGGGTTCTGCGACCTGCATTTGCACTGATAAAACAGGTACATTGACAACAAACCATATGGTCGTGGACAAGATGTGGATCTGTGAAGAAACGAGGACAACAAAAAATTTGGACGACGAAACTGCTTTAAAAAGCTCTGTAAATGAAACGGTATACAATCTCCTTATACAATCTATATTTCAAAATACCAGCTCAGAGGTGGTCAAAGGCAAAGACGGCAGAAACACCATATTAGGCTCTCCAACTGAGACTGCATTGCTAGAATTTGGCTTGCTTATGGGTGGTGCTTTTGGTAAATTGAATGATGAGTATAAGATCGTCAAAGTGGAGCCATTCAATTCAAATAGAAAGAAAATGTCTGTTCTTGTGGCTCTTCCAAGTGGTGGCTTTCGCGCATTTTGCAAGGGAGCATCCGAAATCATTTCATCCATGTGTGACAAGGTTCTCAGTCCTAATGGAGAAGCATTGCCTCTTTCAGATGAAAAAAGAATAAACATCTCGAATATCATTTATAGCTTTGCCAACGGTGCTCTTAGAACTTTATGCATCGCTTACAAGGATATAGAAGTTTCTTCAGCACCAGACAAAATTCCCGATAATGATTTTACTTTAATAGCAGTTGTTGGGATTAAAGATCCTGTACGTCCGGGTGTAAAGGAGGCAGTTCAGGCTTGTTTGGCTGCTGGAATAACTGTAAGGATGGTGACTGGGGATAACATCAATACGGCTAGAGCCATAGCCAAAGAGTGTGGCATTTTGACAGAAGATGGTTTAGCAATAGAAGGGCCAGAGTTTCGCAATAAGAGCCAAGATGAAATGGAGAAGTTAATACCAAAACTCCAGGTGATGGCTCGATCATCTCCTCTTGACAAGCACACGTTGGTTGGTCAATTAAGGAAAACGTTCAAAGAAGTGGTGGCTGTCACAGGTGATGGTACTAATGATGCCCCTGCTTTGCATGAGGCAGACATTGGATTGGCCATGGGTATTGCGGGAACAGAGGTTGCAAAAGAAAATGCGGACGTAGTCATAATGGACGATAATTTCACGACCATTGTTAATGTTGCGAGATGGGGACGTGCAGTCTACATCAACATTCAAAAGTTCGTTCAGTTTCAGCTTACGGTCAACGTAGTCGCTCTCATGCTCAATTTTATATCTGCATGCGCTTCAGGGTCTGCTCCACTGACGGCTGTTCAAATGCTATGGGTGAACTTGATAATGGACACGCTTGGAGCTCTAGCTTTGGCCACAGAGCCTCCCAACGAGGGGCTGATGCAAAGAAAACCGATTGGGAGAAACGTTAATATCATCACTGGGATTATGTGGAGGAACATCATTGGTCAGAGCATCTATCAAATCACAGTGTTATTAATCCTCAGATTTGAAGGAAAGCGCTTGCTGAATCTCACCGGTCCTGATTCAAGCATCATTCTCGACACCTTCATTTTCAACTCCTTCGTGTTTTGCCAGGTGTTCAATGAAGTAAACAGCCGTGACATGGAAAAGATAAACGTGTTGAAAGGGATATTTGACAGCTGGGTATTCATTGGAGTGATGGCCTCGACGGTAGGATTCCAAATCATAATAGTGGAATTTCTTGGGACATTTGCAGAAACAGTGGGATTAAGCTTGAATTTATGGATAGCCAGCATTGTAATTGGAGCTTTGAGTTTGCCAATCGCAATGGTCTTGAAATGCATTCCTGTTTCAAACACCAAAACAACTTCCCACTTCCATGATGGTTATGAGCCTCTCCCTACTGGTCCTGACTTGGCTTAA 3120 42.53 MSETIENYLRKNFDLESKSPSEEAQMRWRSAVSIVKNRRRRFRMVADLEKRAKAEEKRKKLQEKIRVALYVQKAALHFIDAGKRGDYKLSTEVREAGYGVEPDALASMVQTHNTKSLEHYGGVRGLARELNVSLKNGIVTSEIPSRQNIYGINRYVEKPSRGFWMFVWEALHDLTLVILLVSAVISIGVGNATEGWPKGMYDGLGIIMSIFLVVIVTAISDYNQSLQFKDLEKQKKNIIIQVTRDGCRQKVSIYDLVVGDIVHLSIGDQVPADGILVSGYSLSIDESSLSGESEPVNVDDNRPFLLAGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGDDETPLQVKLNGVATIIGKIGLVFAVLTFIVLISRYFVFKALHNQIEHWSSKDASTLLNYFAIAVIIIVVAVPEGLPLAVTLSLAFAMKRLMKDKALVRHLSACETMGSATCICTDKTGTLTTNHMVVDKMWICEETRTTKNLDDETALKSSVNETVYNLLIQSIFQNTSSEVVKGKDGRNTILGSPTETALLEFGLLMGGAFGKLNDEYKIVKVEPFNSNRKKMSVLVALPSGGFRAFCKGASEIISSMCDKVLSPNGEALPLSDEKRINISNIIYSFANGALRTLCIAYKDIEVSSAPDKIPDNDFTLIAVVGIKDPVRPGVKEAVQACLAAGITVRMVTGDNINTARAIAKECGILTEDGLAIEGPEFRNKSQDEMEKLIPKLQVMARSSPLDKHTLVGQLRKTFKEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVVIMDDNFTTIVNVARWGRAVYINIQKFVQFQLTVNVVALMLNFISACASGSAPLTAVQMLWVNLIMDTLGALALATEPPNEGLMQRKPIGRNVNIITGIMWRNIIGQSIYQITVLLILRFEGKRLLNLTGPDSSIILDTFIFNSFVFCQVFNEVNSRDMEKINVLKGIFDSWVFIGVMASTVGFQIIIVEFLGTFAETVGLSLNLWIASIVIGALSLPIAMVLKCIPVSNTKTTSHFHDGYEPLPTGPDLA 1039
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 14953029 14959496 - MELO3C025057.2.1 Cme09g01069 337929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01069 1039 PRINTS H+-transporting ATPase (proton pump) signature 612 630 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cme09g01069 1039 PRINTS H+-transporting ATPase (proton pump) signature 755 771 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cme09g01069 1039 PRINTS H+-transporting ATPase (proton pump) signature 787 812 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cme09g01069 1039 Pfam E1-E2 ATPase 240 433 - -
Cme09g01069 1039 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 461 656 IPR023299 GO:0000166
Cme09g01069 1039 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 110 1016 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Cme09g01069 1039 ProSitePatterns E1-E2 ATPases phosphorylation site. 456 462 IPR018303 -
Cme09g01069 1039 PANTHER CATION TRANSPORTING ATPASE 7 1023 - -
Cme09g01069 1039 Gene3D - 137 337 - -
Cme09g01069 1039 SUPERFAMILY Calcium ATPase, transduction domain A 239 333 IPR008250 -
Cme09g01069 1039 Pfam Cation transporting ATPase, C-terminus 840 1013 IPR006068 -
Cme09g01069 1039 SMART Cation_ATPase_N_a_2 117 191 IPR004014 -
Cme09g01069 1039 CDD P-type_ATPase_Ca_PMCA-like 146 888 - -
Cme09g01069 1039 SFLD p-type atpase 436 807 IPR044492 -
Cme09g01069 1039 SUPERFAMILY Calcium ATPase, transmembrane domain M 118 1017 IPR023298 -
Cme09g01069 1039 Gene3D - 464 659 IPR023299 GO:0000166
Cme09g01069 1039 SFLD C1.7: P-type atpase like 436 807 - -
Cme09g01069 1039 Gene3D - 169 1014 - -
Cme09g01069 1039 Gene3D - 451 800 IPR023214 -
Cme09g01069 1039 PANTHER CALCIUM-TRANSPORTING ATPASE 7 1023 - -
Cme09g01069 1039 Coils Coil 44 65 - -
Cme09g01069 1039 PRINTS P-type cation-transporting ATPase superfamily signature 285 299 - -
Cme09g01069 1039 PRINTS P-type cation-transporting ATPase superfamily signature 454 468 - -
Cme09g01069 1039 PRINTS P-type cation-transporting ATPase superfamily signature 652 663 - -
Cme09g01069 1039 PRINTS P-type cation-transporting ATPase superfamily signature 674 684 - -
Cme09g01069 1039 PRINTS P-type cation-transporting ATPase superfamily signature 755 774 - -
Cme09g01069 1039 PRINTS P-type cation-transporting ATPase superfamily signature 779 791 - -
Cme09g01069 1039 SUPERFAMILY HAD-like 453 860 IPR036412 -
Cme09g01069 1039 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 725 840 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cme09g01069 1039 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 206 518 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cme09g01069 1039 Pfam Cation transporter/ATPase, N-terminus 118 186 IPR004014 -
Cme09g01069 1039 Pfam haloacid dehalogenase-like hydrolase 452 769 - -
Cme09g01069 1039 Gene3D - 20 81 - -
Cme09g01069 1039 Pfam Ca2+-ATPase N terminal autoinhibitory domain 10 52 IPR024750 GO:0005516
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g02051 Cme-Chr4:27914494 Cme09g01069 Cme-Chr9:14953029 0 dispersed
Cme05g01776 Cme-Chr5:26749671 Cme09g01069 Cme-Chr9:14953029 0 dispersed
Cme07g00287 Cme-Chr7:1857193 Cme09g01069 Cme-Chr9:14953029 0 dispersed
Cme09g01069 Cme-Chr9:14953029 Cme12g00230 Cme-Chr12:2597422 6.76E-95 dispersed
Cme11g00715 Cme-Chr11:8588898 Cme09g01069 Cme-Chr9:14953029 1.28E-09 dispersed
Cme09g01069 Cme-Chr9:14953029 Cme08g00653 Cme-Chr8:4271327 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01069 K01537 - csv:101203529 1964.12