Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01145 ATGGCGCTCTCTGATAAACCCTCTCGCCAATCTCTGATCCCCAGCTTCCTTTACTCTTCCCCTTCTTCCACTCGAACTCTTCCTCTCATGAAGATGCTTCAGTCTTCACCCACTCTCGATTCGGTTTCCTCTCCTTCTCCTAAGACCTTTGTTATTCCCTCCCCCACTGAGCCCTCTAAGAAGATCGAGATGTACTCTCCAGCCTTTTACACTGCTTGTACTTTTGGTGGAATTCTCAGCTGTGGTCTTACTCATATGGCTGTTACTCCTCTTGATTTGGTTAAATGTAATATGCAGGAAGTTAACGAGGGTGTTGTGTTTGTTCAGATTGATCCTGCGAAATACAAAAGTATTTCATCTGGTTTTGGAGTTTTGCTCAAGGAGCAGGGTGTGAGGGGTTTCTTCAGGGGCTGGGTGCCTACCCTTCTTGGGTACAGTGCACAGGGTGCTTGCAAGTTTGGATTCTACGAGTTCTTTAAGAAGTATTACTCTGATATTGCTGGACCTGAGTACGCTGCTAAGTACAAGACCTTGATCTACCTTGCCGGTTCTGCATCTGCTGAGGTGATTGCTGATATTGCACTTTGCCCTTTTGAAGCAGTGAAGGTTCGTGTTCAAACTCAGCCTGGTTTTGCTAGAGGTCTAGCTGATGGACTTCCCAAGTTCGTCAGATCTGAAGGAACTCTTGGGTTGTACAAGGGTATTGTTCCACTCTGGGGACGACAGATTCCATACGCTAATGACATTGCTGACACGATGATGAAGTTTGCATCCTTTGAGACAATAGTTGAGATGCTATACAAGTATGCCATTCCCACACCAAAGGACCAGTGCAGCAAATCTCTCCAGCTTGGTGTTAGTTTTGCTGGTGGATATGTGGCTGGTGTTTTCTGTGCTATCGTGTCTCATCCTGCCGATAATCTTGTGTCGTTCCTCAACAACGCCAAAGGAGCCACTGTTGGTGATGCTGTCAAGAAGCTCGGATTATGGGGTCTCTTCACCCGTGGGCTACCTCTCCGTATTGTGATGATTGGAACTCTTACTGGTGCTCAATGGGGTATCTATGATGCCTTCAAAGTATTTGTTGGACTGCCTACCACCGGTGGCCCGGCGCCTGCTGCTGCCCCTGCACCTGCTGCAGCTGAGCTTGCAAAGGCGTATTCACATTGTTTTGACTCTGAGATGCCTACTCTATTGAATGACAACACTACTTAA 1215 47.24 MALSDKPSRQSLIPSFLYSSPSSTRTLPLMKMLQSSPTLDSVSSPSPKTFVIPSPTEPSKKIEMYSPAFYTACTFGGILSCGLTHMAVTPLDLVKCNMQEVNEGVVFVQIDPAKYKSISSGFGVLLKEQGVRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADIALCPFEAVKVRVQTQPGFARGLADGLPKFVRSEGTLGLYKGIVPLWGRQIPYANDIADTMMKFASFETIVEMLYKYAIPTPKDQCSKSLQLGVSFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGPAPAAAPAPAAAELAKAYSHCFDSEMPTLLNDNTT 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 16129838 16134456 + MELO3C033942.2.1 Cme09g01145 338005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01145 404 Gene3D Mitochondrial carrier domain 247 390 IPR023395 -
Cme09g01145 404 ProSiteProfiles Solute carrier (Solcar) repeat profile. 282 361 IPR018108 -
Cme09g01145 404 ProSiteProfiles Solute carrier (Solcar) repeat profile. 175 265 IPR018108 -
Cme09g01145 404 ProSiteProfiles Solute carrier (Solcar) repeat profile. 68 162 IPR018108 -
Cme09g01145 404 MobiDBLite consensus disorder prediction 1 21 - -
Cme09g01145 404 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 1 378 - -
Cme09g01145 404 Pfam Mitochondrial carrier protein 179 269 IPR018108 -
Cme09g01145 404 Pfam Mitochondrial carrier protein 71 164 IPR018108 -
Cme09g01145 404 Gene3D Mitochondrial carrier domain 12 246 IPR023395 -
Cme09g01145 404 SUPERFAMILY Mitochondrial carrier 71 357 IPR023395 -
Cme09g01145 404 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 1 378 IPR044677 GO:0005315|GO:1990547
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g02103 Cme-Chr2:26819506 Cme09g01145 Cme-Chr9:16129838 0 dispersed
Cme06g01908 Cme-Chr6:22670156 Cme09g01145 Cme-Chr9:16129838 0 dispersed
Cme09g01145 Cme-Chr9:16129838 Cme06g00138 Cme-Chr6:842810 8.89E-11 dispersed
Cme09g01145 Cme-Chr9:16129838 Cme08g02449 Cme-Chr8:31357978 2.56E-08 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01145 K15102 - csv:101221771 681.019