Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme09g01191 | ATGGTTGTTGCTCTTGAATCCACCCCTTTCCACGTTCTTGCTGTTGATGATAGCTTCATCGATCGCAAATTGATCGAACGCCTCCTCAAAACCTCTTCCTATCATGTTACTGCTGTTGATTCCGGCACTAAGGCCTTGGAATTTCTCGGTCTTGTTCAAGATCACGATCAACAAACTGACTCCAAAATCGCTCCTGAAAATCATCATCATCAAGAAGTGGATGTAAATTTAATCATCACGGATTACAGTATGCCTGGAATGAGTGGCTACGAACTCCTCAGAAAAATCAAGGAATCGAAATCTCTTAAAGACATACCGGTTGTGATTATGTCATCTGAGAATGTTCCTTCAAGAATCAACAGATGCTTGGAAGAAGGAGCGGAAGAATTCTTCCTCAAACCAGTTCAATTATCCGATGTCAGGAAATTGAGACCTCATTTGATTAAAGAAAAATCCACAAACAATTGA | 468 | 40.38 | MVVALESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQDHDQQTDSKIAPENHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTNN | 155 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 16670479 | 16671579 | - | MELO3C005156.2.1 | Cme09g01191 | 338051 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme09g01191 | 155 | CDD | REC_typeA_ARR | 12 | 143 | - | - | |
Cme09g01191 | 155 | SUPERFAMILY | CheY-like | 9 | 143 | IPR011006 | - | |
Cme09g01191 | 155 | PANTHER | RESPONSE REGULATOR ARR8, PUTATIVE-RELATED | 3 | 153 | - | - | |
Cme09g01191 | 155 | ProSiteProfiles | Response regulatory domain profile. | 11 | 148 | IPR001789 | GO:0000160 | |
Cme09g01191 | 155 | SMART | REC_2 | 10 | 144 | IPR001789 | GO:0000160 | |
Cme09g01191 | 155 | Pfam | Response regulator receiver domain | 12 | 142 | IPR001789 | GO:0000160 | |
Cme09g01191 | 155 | Gene3D | - | 11 | 154 | - | - | |
Cme09g01191 | 155 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 3 | 153 | IPR045279 | GO:0009736 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme03g00540 | Cme-Chr3:8082730 | Cme09g01191 | Cme-Chr9:16670479 | 2.22E-58 | dispersed | |
Cme08g01358 | Cme-Chr8:10713711 | Cme09g01191 | Cme-Chr9:16670479 | 1.20E-69 | dispersed | |
Cme09g01191 | Cme-Chr9:16670479 | Cme10g00026 | Cme-Chr10:275521 | 1.55E-61 | dispersed | |
Cme09g01191 | Cme-Chr9:16670479 | Cme10g00486 | Cme-Chr10:3124244 | 6.21E-56 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
41951 | PF00072 | Response_reg | 4.40E-21 | CL0304 | Cme | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme09g01191 | K14492 | - | csv:101210839 | 297.36 |