Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01191 ATGGTTGTTGCTCTTGAATCCACCCCTTTCCACGTTCTTGCTGTTGATGATAGCTTCATCGATCGCAAATTGATCGAACGCCTCCTCAAAACCTCTTCCTATCATGTTACTGCTGTTGATTCCGGCACTAAGGCCTTGGAATTTCTCGGTCTTGTTCAAGATCACGATCAACAAACTGACTCCAAAATCGCTCCTGAAAATCATCATCATCAAGAAGTGGATGTAAATTTAATCATCACGGATTACAGTATGCCTGGAATGAGTGGCTACGAACTCCTCAGAAAAATCAAGGAATCGAAATCTCTTAAAGACATACCGGTTGTGATTATGTCATCTGAGAATGTTCCTTCAAGAATCAACAGATGCTTGGAAGAAGGAGCGGAAGAATTCTTCCTCAAACCAGTTCAATTATCCGATGTCAGGAAATTGAGACCTCATTTGATTAAAGAAAAATCCACAAACAATTGA 468 40.38 MVVALESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQDHDQQTDSKIAPENHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTNN 155
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 16670479 16671579 - MELO3C005156.2.1 Cme09g01191 338051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01191 155 CDD REC_typeA_ARR 12 143 - -
Cme09g01191 155 SUPERFAMILY CheY-like 9 143 IPR011006 -
Cme09g01191 155 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 3 153 - -
Cme09g01191 155 ProSiteProfiles Response regulatory domain profile. 11 148 IPR001789 GO:0000160
Cme09g01191 155 SMART REC_2 10 144 IPR001789 GO:0000160
Cme09g01191 155 Pfam Response regulator receiver domain 12 142 IPR001789 GO:0000160
Cme09g01191 155 Gene3D - 11 154 - -
Cme09g01191 155 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 153 IPR045279 GO:0009736
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g00540 Cme-Chr3:8082730 Cme09g01191 Cme-Chr9:16670479 2.22E-58 dispersed
Cme08g01358 Cme-Chr8:10713711 Cme09g01191 Cme-Chr9:16670479 1.20E-69 dispersed
Cme09g01191 Cme-Chr9:16670479 Cme10g00026 Cme-Chr10:275521 1.55E-61 dispersed
Cme09g01191 Cme-Chr9:16670479 Cme10g00486 Cme-Chr10:3124244 6.21E-56 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
41951 PF00072 Response_reg 4.40E-21 CL0304 Cme TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01191 K14492 - csv:101210839 297.36