Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01199 ATGATTCTAGCCCACCTTTGTGATGAACCCAAGGGCTTGAAAACTGGAATGTGCATGTCACTATTATTTCTTCCTCTTGCCATTGCAAATGCTCTCACAGCAAGGCTTAACGACGGGGTACCTTTAGTTGATGAAAGTCTAGTTGTTCTTGGTTATTGTCTTTTTACTGGTGCTCTGTATTTGCACTTCGCAACTTCAGTCATTCATGAGATCACCACTGCATTGGGAATCTATTGCTTCAGGTGA 246 42.28 MILAHLCDEPKGLKTGMCMSLLFLPLAIANALTARLNDGVPLVDESLVVLGYCLFTGALYLHFATSVIHEITTALGIYCFR 81
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 16854174 16855823 - MELO3C005163.2.1 Cme09g01199 338059

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01199 81 PANTHER CHOLINE/ETHANOLAMINEPHOSPHOTRANSFERASE 2 1 81 - -
Cme09g01199 81 PANTHER ETHANOLAMINEPHOSPHOTRANSFERASE 1 81 IPR014472 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01199 K00993 EPT1; ethanolaminephosphotransferase [EC:2.7.8.1] - csv:101220610 166.392
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme09g01199 Cme-Chr9:16854174 Cme12g00397 Cme-Chr12:5714340 1.52E-52 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1023 Blo01g00471 . Bda01g02109 . . . . . . . . . . . . . Cpe01g01905 . . . . . . . . . . . . . . . . . . . Csa05g02552 Chy10g01092 . . . . . . Bpe02g02297 Bma01g00142 Bma06g00787 . Cmo04g02295 Cmo15g00868 Cma04g02195 Cma15g00838 Car04g02122 Car15g00787 . . Bhi12g01050 . . . Hepe02g2533 . Lcy10g1523 Cla01g00726 Cam01g0754 Cec01g0753 Cco01g0779 Clacu01g0746 Cmu01g0715 Cre09g1790 Lsi09g00788 . . Cme09g01199
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000843 2 13 2 2 2 2 4 2 2 2 3 2 3 2 8 3 2 2 2 2 3 2 3 3 3 1 2 6 4 1 90
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cme09g01199 Cme_Chr09 FPKM 0.165863 0.0 4.99537 3.505966 4.22857 3.68117 4.645556 0.0 0.0 0.0