Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme09g01229 | ATGAATGGCGATGTAGCTCCGGCCGCCACTCCGGCCGCCTCAGCCGAGCCCCAATACATCAGGGCTAAGACTTCTGTTTGGTGGGACATCGAGAACTGTCAGGTCCCTAAGGGATGTGATCCTCACGCCATCGCCCAAAATATCAGTTCTGCCCTCGTCAAAATCAACTATTGTGGCCCTGTTTCCATTTCCGCTTATGGGGATACTAATCGCATTCCTAATTCTATTCAACAGGCTCTTTCTAGTACTGGCATCGCTTTGAATCATGTTCCTGCTGGTGTTAAAGATGCAAGTGATAAGAAGATTCTAGTCGATATGTTGTTTTGGGCAGTTGATAACCCTGCTCCTGCAAATTATTTGCTAATTTCGGGTGATAGGGATTTTTCTAACGCACTTCATCAATTAAGAATGAGAAGATATAATATTCTTCTTGCGCAACCACAAAAGGCTTCTGCACCACTAGTAGCAGCAGCAAAGAGTGTTTGGCTTTGGATGAGTCTTGTAGCTGGTGGACCTCCAATGTCCAGTACTGAATCATCTCAACTTGTGAATGGTATTCCTACTTCTGAACCTCAAATATCTCAGACCTCTGGATTTGATCAGAATATGCACACAGGACAAGCTATAGTACACAAACCTGAAAATGTCAATTTGGGAAACCAAAGATCTTATTCTACCGAGAGGACGGGCGACAATAAACATAAAGGTAAATATGTACAGAAAAGCTCCAACCAACCAGTTATATCCAGAGCTTTAAGCTCACCTGCATCTATGCAAGAGAAAAACCCTAATTTTTTAAACCAACCAAATCATATGCAAGCAAAGCAGTTTAAGAAAGCACCCCACGAATTCTTTGGAAATAGCAATCCTGTAGGCTCTTCTAGTCAATCTACTCCAAACTTGTTTATTGAAAATTCCAGCCATGCTAGGACTGATGCCAATGGTTCAATCGGTAGTTCCTCATTTCACCAACCTCCTCACCTGAATCATGCTAGATCTGATGGCAATATTTCAATGGGTAATTCCTCAAGTTACCAACCTCCTCACATGAGGCAAAACAACATGCAGCTCCATCCTCCTTTTCGACCGGATAATGTTTTTCCTCCTAACTCTCTTAATCATAATTCTTTTCCAGTCCCTGGTCAACCTGAACTCTCTGCACCCAATATTAGTCAGCTACATATATCTGATTATCCCAATTATCCTATAAATTCTCAAAATTTCCATCAACAAACTGGTGAATTTAGACCACATTCTAAGTCTCAAAATCCTGCTAACTTTAATGCACCAGACAAAGGCCGTAGTCAGCATGGTGGCCAATCATTCCATCATGATGCATTGAATAAAAGACATGCCCGTGATGCAGTAGAGTATGCACCTCATTCATCTTCTACCATAGTTACTAGAAGTTTATCTCATAACGATGGCTGGGGATCTCAGGGGCAACCACCACCATCAGAGTACATTCAAGGCCTCATTGGAGTTATTCTTCTTGCATTGAACACCCTGAAAGTGGAAAAAATTATGCCAATTGAGGCAAATATAGCTGACTGCATCCGATATGGAGATTTGAGAAACTGCAATACTGATGTAAAAATGGCACTAGATAGTGCGGTAGAGCATAATATGGTAGTGAAGCAGAACTTAGGAGCAGTGCAATTGTATGTTGGTAAAACAGAAAAACTGTGGAAATGTGTGAACCCTCTAGGTGGTTATCCTAATCAGTACCCAAAAGCTATATGGGATAAGATTCGTAATTGTTTAGCTTCTCCAGCTGGTCGTTCTGCAATGATGGCTTCGCGTTGCAGATATGAAGCAGCATTGATTCTGAAGAAAGAATGCTTAACAGATTTTGCCTTGGGCGATGTGCTGCAGATTTTGCATATGATAACCTCAATGAAGAAATGGATTACTCATCATATTTCAGGATGGCAGCCAATTAATATTATACTAGCAGAAGGTAATACAGATGCAAGTTCAAGAACCGAACTTGATTGA | 1998 | 41.34 | MNGDVAPAATPAASAEPQYIRAKTSVWWDIENCQVPKGCDPHAIAQNISSALVKINYCGPVSISAYGDTNRIPNSIQQALSSTGIALNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWMSLVAGGPPMSSTESSQLVNGIPTSEPQISQTSGFDQNMHTGQAIVHKPENVNLGNQRSYSTERTGDNKHKGKYVQKSSNQPVISRALSSPASMQEKNPNFLNQPNHMQAKQFKKAPHEFFGNSNPVGSSSQSTPNLFIENSSHARTDANGSIGSSSFHQPPHLNHARSDGNISMGNSSSYQPPHMRQNNMQLHPPFRPDNVFPPNSLNHNSFPVPGQPELSAPNISQLHISDYPNYPINSQNFHQQTGEFRPHSKSQNPANFNAPDKGRSQHGGQSFHHDALNKRHARDAVEYAPHSSSTIVTRSLSHNDGWGSQGQPPPSEYIQGLIGVILLALNTLKVEKIMPIEANIADCIRYGDLRNCNTDVKMALDSAVEHNMVVKQNLGAVQLYVGKTEKLWKCVNPLGGYPNQYPKAIWDKIRNCLASPAGRSAMMASRCRYEAALILKKECLTDFALGDVLQILHMITSMKKWITHHISGWQPINIILAEGNTDASSRTELD | 665 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 17187751 | 17191674 | - | MELO3C005198.2.1 | Cme09g01229 | 338089 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme09g01229 | 665 | MobiDBLite | consensus disorder prediction | 456 | 483 | - | - | |
Cme09g01229 | 665 | MobiDBLite | consensus disorder prediction | 282 | 301 | - | - | |
Cme09g01229 | 665 | MobiDBLite | consensus disorder prediction | 334 | 353 | - | - | |
Cme09g01229 | 665 | MobiDBLite | consensus disorder prediction | 310 | 376 | - | - | |
Cme09g01229 | 665 | MobiDBLite | consensus disorder prediction | 216 | 246 | - | - | |
Cme09g01229 | 665 | PANTHER | LIMKAIN B LKAP | 14 | 647 | IPR024768 | GO:0005777|GO:0010468|GO:1903231 | |
Cme09g01229 | 665 | MobiDBLite | consensus disorder prediction | 287 | 301 | - | - | |
Cme09g01229 | 665 | MobiDBLite | consensus disorder prediction | 403 | 435 | - | - | |
Cme09g01229 | 665 | CDD | PIN_limkain_b1_N_like | 23 | 147 | - | - | |
Cme09g01229 | 665 | Pfam | NYN domain | 23 | 159 | IPR021139 | GO:0004540 | |
Cme09g01229 | 665 | MobiDBLite | consensus disorder prediction | 403 | 443 | - | - | |
Cme09g01229 | 665 | MobiDBLite | consensus disorder prediction | 461 | 483 | - | - | |
Cme09g01229 | 665 | Pfam | OST-HTH Associated domain | 600 | 655 | IPR025677 | - | |
Cme09g01229 | 665 | MobiDBLite | consensus disorder prediction | 310 | 327 | - | - | |
Cme09g01229 | 665 | Gene3D | - | 18 | 166 | - | - | |
Cme09g01229 | 665 | PANTHER | ACID BINDING PROTEIN, PUTATIVE-RELATED | 14 | 647 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme06g01313 | Cme-Chr6:10990901 | Cme09g01229 | Cme-Chr9:17187751 | 3.11E-32 | dispersed | |
Cme09g01229 | Cme-Chr9:17187751 | Cme11g00086 | Cme-Chr11:725357 | 3.76E-41 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme09g01229 | - | - | cmo:103503825 | 1361.28 |