Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01229 ATGAATGGCGATGTAGCTCCGGCCGCCACTCCGGCCGCCTCAGCCGAGCCCCAATACATCAGGGCTAAGACTTCTGTTTGGTGGGACATCGAGAACTGTCAGGTCCCTAAGGGATGTGATCCTCACGCCATCGCCCAAAATATCAGTTCTGCCCTCGTCAAAATCAACTATTGTGGCCCTGTTTCCATTTCCGCTTATGGGGATACTAATCGCATTCCTAATTCTATTCAACAGGCTCTTTCTAGTACTGGCATCGCTTTGAATCATGTTCCTGCTGGTGTTAAAGATGCAAGTGATAAGAAGATTCTAGTCGATATGTTGTTTTGGGCAGTTGATAACCCTGCTCCTGCAAATTATTTGCTAATTTCGGGTGATAGGGATTTTTCTAACGCACTTCATCAATTAAGAATGAGAAGATATAATATTCTTCTTGCGCAACCACAAAAGGCTTCTGCACCACTAGTAGCAGCAGCAAAGAGTGTTTGGCTTTGGATGAGTCTTGTAGCTGGTGGACCTCCAATGTCCAGTACTGAATCATCTCAACTTGTGAATGGTATTCCTACTTCTGAACCTCAAATATCTCAGACCTCTGGATTTGATCAGAATATGCACACAGGACAAGCTATAGTACACAAACCTGAAAATGTCAATTTGGGAAACCAAAGATCTTATTCTACCGAGAGGACGGGCGACAATAAACATAAAGGTAAATATGTACAGAAAAGCTCCAACCAACCAGTTATATCCAGAGCTTTAAGCTCACCTGCATCTATGCAAGAGAAAAACCCTAATTTTTTAAACCAACCAAATCATATGCAAGCAAAGCAGTTTAAGAAAGCACCCCACGAATTCTTTGGAAATAGCAATCCTGTAGGCTCTTCTAGTCAATCTACTCCAAACTTGTTTATTGAAAATTCCAGCCATGCTAGGACTGATGCCAATGGTTCAATCGGTAGTTCCTCATTTCACCAACCTCCTCACCTGAATCATGCTAGATCTGATGGCAATATTTCAATGGGTAATTCCTCAAGTTACCAACCTCCTCACATGAGGCAAAACAACATGCAGCTCCATCCTCCTTTTCGACCGGATAATGTTTTTCCTCCTAACTCTCTTAATCATAATTCTTTTCCAGTCCCTGGTCAACCTGAACTCTCTGCACCCAATATTAGTCAGCTACATATATCTGATTATCCCAATTATCCTATAAATTCTCAAAATTTCCATCAACAAACTGGTGAATTTAGACCACATTCTAAGTCTCAAAATCCTGCTAACTTTAATGCACCAGACAAAGGCCGTAGTCAGCATGGTGGCCAATCATTCCATCATGATGCATTGAATAAAAGACATGCCCGTGATGCAGTAGAGTATGCACCTCATTCATCTTCTACCATAGTTACTAGAAGTTTATCTCATAACGATGGCTGGGGATCTCAGGGGCAACCACCACCATCAGAGTACATTCAAGGCCTCATTGGAGTTATTCTTCTTGCATTGAACACCCTGAAAGTGGAAAAAATTATGCCAATTGAGGCAAATATAGCTGACTGCATCCGATATGGAGATTTGAGAAACTGCAATACTGATGTAAAAATGGCACTAGATAGTGCGGTAGAGCATAATATGGTAGTGAAGCAGAACTTAGGAGCAGTGCAATTGTATGTTGGTAAAACAGAAAAACTGTGGAAATGTGTGAACCCTCTAGGTGGTTATCCTAATCAGTACCCAAAAGCTATATGGGATAAGATTCGTAATTGTTTAGCTTCTCCAGCTGGTCGTTCTGCAATGATGGCTTCGCGTTGCAGATATGAAGCAGCATTGATTCTGAAGAAAGAATGCTTAACAGATTTTGCCTTGGGCGATGTGCTGCAGATTTTGCATATGATAACCTCAATGAAGAAATGGATTACTCATCATATTTCAGGATGGCAGCCAATTAATATTATACTAGCAGAAGGTAATACAGATGCAAGTTCAAGAACCGAACTTGATTGA 1998 41.34 MNGDVAPAATPAASAEPQYIRAKTSVWWDIENCQVPKGCDPHAIAQNISSALVKINYCGPVSISAYGDTNRIPNSIQQALSSTGIALNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWMSLVAGGPPMSSTESSQLVNGIPTSEPQISQTSGFDQNMHTGQAIVHKPENVNLGNQRSYSTERTGDNKHKGKYVQKSSNQPVISRALSSPASMQEKNPNFLNQPNHMQAKQFKKAPHEFFGNSNPVGSSSQSTPNLFIENSSHARTDANGSIGSSSFHQPPHLNHARSDGNISMGNSSSYQPPHMRQNNMQLHPPFRPDNVFPPNSLNHNSFPVPGQPELSAPNISQLHISDYPNYPINSQNFHQQTGEFRPHSKSQNPANFNAPDKGRSQHGGQSFHHDALNKRHARDAVEYAPHSSSTIVTRSLSHNDGWGSQGQPPPSEYIQGLIGVILLALNTLKVEKIMPIEANIADCIRYGDLRNCNTDVKMALDSAVEHNMVVKQNLGAVQLYVGKTEKLWKCVNPLGGYPNQYPKAIWDKIRNCLASPAGRSAMMASRCRYEAALILKKECLTDFALGDVLQILHMITSMKKWITHHISGWQPINIILAEGNTDASSRTELD 665
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 17187751 17191674 - MELO3C005198.2.1 Cme09g01229 338089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01229 665 MobiDBLite consensus disorder prediction 456 483 - -
Cme09g01229 665 MobiDBLite consensus disorder prediction 282 301 - -
Cme09g01229 665 MobiDBLite consensus disorder prediction 334 353 - -
Cme09g01229 665 MobiDBLite consensus disorder prediction 310 376 - -
Cme09g01229 665 MobiDBLite consensus disorder prediction 216 246 - -
Cme09g01229 665 PANTHER LIMKAIN B LKAP 14 647 IPR024768 GO:0005777|GO:0010468|GO:1903231
Cme09g01229 665 MobiDBLite consensus disorder prediction 287 301 - -
Cme09g01229 665 MobiDBLite consensus disorder prediction 403 435 - -
Cme09g01229 665 CDD PIN_limkain_b1_N_like 23 147 - -
Cme09g01229 665 Pfam NYN domain 23 159 IPR021139 GO:0004540
Cme09g01229 665 MobiDBLite consensus disorder prediction 403 443 - -
Cme09g01229 665 MobiDBLite consensus disorder prediction 461 483 - -
Cme09g01229 665 Pfam OST-HTH Associated domain 600 655 IPR025677 -
Cme09g01229 665 MobiDBLite consensus disorder prediction 310 327 - -
Cme09g01229 665 Gene3D - 18 166 - -
Cme09g01229 665 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 14 647 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g01313 Cme-Chr6:10990901 Cme09g01229 Cme-Chr9:17187751 3.11E-32 dispersed
Cme09g01229 Cme-Chr9:17187751 Cme11g00086 Cme-Chr11:725357 3.76E-41 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01229 - - cmo:103503825 1361.28